Author

Ling Xiao

Broad InstituteORCID 0000-0002-5463-5576Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 1 Cell Biology· 1 Genomics· 1

Signature Assays, Organisms & Methods

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Organism:human· 2 Assay:bulk RNA-seq· 1 Research Focus:cell type annotation· 1 Assay:electronic health records· 1 Approach:experimental assay· 1 Research Focus:gene regulatory network inference· 1 Approach:machine learning (classical)· 1 Assay:spatial transcriptomics· 1

Frequent Co-Authors

Patrick T. EllinoriD· 2 shared Anant Chopra· 1 shared Christina V. TheodorisiD· 1 shared Elizabeth M. BrydoniD· 1 shared Emeli ChatterjeeiD· 1 shared Eric R. GamazoniD· 1 shared Hailing ShiiD· 1 shared Hao SheniD· 1 shared

Activity by Year

2023-2025 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 15 mutual co-author links

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2 shared papersCell Biology

Patrick T. EllinorORCID

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3 papers

Recent·Most cited

A role of extracellular vesicle-mediated inter-organ communication in obesity-related arrhythmia

Worawan B. Limpitikul, Marta García-Contreras, Michael J. Betti, Paul Spangler, Quanhu Sheng, Steffen Pabel, Samuel Tobias Sossalla, Ling Xiao, Emeli Chatterjee, Patrick T. Ellinor, Eric R. Gamazon, Ravi V. Shah, Saumya Das

This paper shows that obesity-related extracellular vesicles from visceral adipose tissue impair cardiac function and contribute to arrhythmia by affecting cardiomyocytes, fibroblasts, and macrophages.

bioRxiv · Sep 13, 2025 · PreprintCell Biology

Transfer learning enables predictions in network biology

Christina V. Theodoris, Ling Xiao, Anant Chopra, Mark D. Chaffin, Zeina Reda Al Sayed, Matthew C. Hill, Helene Mantineo, Elizabeth M. Brydon, Zexian Zeng, X. Shirley Liu, Patrick T. Ellinor

The paper applies transfer learning to predict network biology features across different biological contexts.

Nature · May 31, 2023Peer-reviewedBioinformatics

In situ electro-sequencing in three-dimensional tissues

Qiang Li, Zuwan Lin, Ren Liu, Xin Tang, Jiahao Huang, Yichun He, Xin Sui, Weiwen Tian, Hao Shen, Haowen Zhou, Hao Sheng, Hailing Shi, Ling Xiao, Xiao Wang, Jia Liu B

This paper introduces in situ electro-sequencing to map gene expression and electrophysiology in 3D tissues, improving cell type analysis and developmental trajectory reconstruction.

Cell · Apr 1, 2023Peer-reviewedGenomics