Author

Emily Toth Martin

University of MichiganORCID 0000-0002-5771-8895Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Organism:human· 2 Approach:statistical model· 2 Research Focus:variant calling· 2 Assay:whole-genome sequencing· 2 Organism:chicken / avian· 1 Approach:experimental assay· 1 Research Focus:host-pathogen & immune response· 1 Assay:metagenomics· 1

Frequent Co-Authors

Adam S. LauringiD· 3 shared William J. FitzsimmonsiD· 3 shared Alexandra M. MellisiD· 2 shared Carlos Gabriel GrijalvaiD· 2 shared Emily E. BendalliD· 2 shared H. Keipp TalbotiD· 2 shared Melissa A R RolfesiD· 2 shared Natasha HalasaiD· 2 shared

Activity by Year

2024-2025 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 38 mutual co-author links

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3 shared papersMicrobiology

Adam S. LauringORCID

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3 papers

Recent·Most cited

MicrobiologyPLoS PathogensPeer-reviewedApr 28, 2025

In depth sequencing of a serially sampled household cohort reveals the within-host dynamics of Omicron SARS-CoV-2 and rare selection of novel spike variants

Emily E. Bendall, Derek E. Dimcheff, Leigh Papalambros…·Adam S. Lauring

This study uses longitudinal sequencing of a household cohort to analyze within-host SARS-CoV-2 dynamics, finding rare positive selection in spike and genetic hitchhiking between synonymous and nonsynonymous variants.

3 citations

humanwhole-genome sequencing

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MicrobiologybioRxivPreprintJul 4, 2024

Surveillance of H5 HPAI in Michigan using retail milk

Adam S. Lauring, Emily Toth Martin, Marisa C. Eisenberg…·Natasha Bagdasarian

This study uses milk samples from Michigan markets to detect H5N1 avian influenza virus, finding two positive samples suggesting potential HPAI spread in dairy herds.

4 citations

chicken / avianmetagenomics

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MicrobiologyVirus EvolutionPeer-reviewedJan 1, 2024

Influenza A virus within-host evolution and positive selection in a densely sampled household cohort over three seasons

Emily E. Bendall, Yuwei Zhu, William J. Fitzsimmons…·Adam S. Lauring

This study analyzes within-host influenza A virus evolution in a household cohort over three seasons, finding purifying selection and rare positive selection.

13 citations

humanwhole-genome sequencing

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