Author

Jack Jennings

Newcastle UniversityORCID 0000-0002-6108-9155Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Research Focus:benchmarking· 2 Approach:benchmark study· 1 Approach:experimental assay· 1 Research Focus:software / tool· 1

Frequent Co-Authors

Marco MancaiD· 2 shared Roman BaueriD· 2 shared Vasileios VavourakisiD· 2 shared Adam ŠmelkoiD· 1 shared Ahmad HesamiD· 1 shared Alberto Di MeglioiD· 1 shared Alejandro Madrid-ValienteiD· 1 shared Alexander George FletcheriD· 1 shared

Activity by Year

2021-2025 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 33 mutual co-author links

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2 shared papersSystems Biology

Marco MancaORCID

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2 papers

Recent·Most cited

Open Benchmarking for Cell-Based Multiscale Models: Lessons from a Community Initiative

Thaleia Ntiniakou, James M. Osborne, Jieling Zhao, Jules Dichamp, Nicolò Cogno, Randy W. Heiland, Kwabena Amponsah, Jiří Pešek, Tobias Duswald, Othmane Hayoun-Mya, Jack Jennings, Matteo Pedrazzi, Ryan Bournes, Marco Ruscone, Fergus Cooper, , Arnau Montagud

This paper presents a community-driven benchmarking initiative for cell-based multiscale models, highlighting variations in tool implementations and advocating for standardized benchmarks and interoperability.

bioRxiv · Jul 16, 2025 · PreprintSystems Biology

BioDynaMo: a general platform for scalable agent-based simulation

Lukas Breitwieser, Ahmad Hesam, Jean de Montigny, Vasileios Vavourakis, Alexandros Iosif, Jack Jennings, Marcus Kaiser, Marco Manca, Alberto Di Meglio, Zaid Al-Ars, Fons Rademakers, Onur Mutlu, Roman Bauer

BioDynaMo is a scalable agent-based simulation platform that outperforms existing tools by three orders of magnitude, enabling large-scale simulations in neuroscience, oncology, and epidemiology.

Bioinformatics · Sep 13, 2021Peer-reviewedSystems Biology