Author

Trudy M. Wassenaar

Molecular Microbiology and Genomics Consultants (Germany)ORCID 0000-0002-7024-1139Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Genetics· 1 Genomics· 1

Signature Assays, Organisms & Methods

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Organism:E. coli· 2 Approach:statistical model· 2 Research Focus:database / resource· 1 Research Focus:differential expression· 1 Approach:experimental assay· 1 Research Focus:gene regulatory network inference· 1 Organism:human· 1 Assay:long-read sequencing· 1

Frequent Co-Authors

David Wayne UsseryiD· 2 shared Visanu WanchaiiD· 2 shared Aime T. FrancoiD· 1 shared Carissa BlekeriD· 1 shared Intawat NookaewiD· 1 shared Kaleb Z. AbramiD· 1 shared Michael L. JenningsiD· 1 shared Michael Scott RobesoniD· 1 shared

Activity by Year

2018-2021 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 30 mutual co-author links

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2 shared papersGenomics

David Wayne UsseryORCID

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2 papers

Recent·Most cited

GenomicsCommunications BiologyPeer-reviewedJan 26, 2021

What can we learn from over 100,000 Escherichia coli genomes?

Kaleb Z. Abram, Zulema Udaondo, Carissa Bleker…·David Wayne Ussery

This study analyzes over 100,000 E. coli genomes to identify 14 phylogroups, revealing population structure and genomic adaptations in virulence and antibiotic resistance.

126 citationstop 1%

E. coliwhole-genome sequencing

𝕏 PostBluesky

GeneticsbioRxivPreprintDec 17, 2018

Decoding the Epitranscriptional Landscape from Native RNA Sequences

Thidathip Wongsurawat, Piroon Jenjaroenpun, Trudy M. Wassenaar…·Intawat Nookaew

The paper develops ELIGOS, a bioinformatic tool to detect RNA modifications and secondary structures using native RNA sequencing data from E. coli, yeast, and human cells.

21 citations

E. coliyeast

𝕏 PostBluesky