Author

Gopal Varma

Beth Israel Deaconess Medical CenterORCID 0000-0002-7060-1982Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Neuroscience· 3 Cell Biology· 1

Signature Assays, Organisms & Methods

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Organism:human· 4 Research Focus:cell type annotation· 2 Research Focus:dimensionality reduction· 2 Approach:experimental assay· 2 Assay:imaging· 2 Approach:statistical model· 2 Research Focus:benchmarking· 1 Research Focus:cell-cell communication· 1

Frequent Co-Authors

Andreea HertanuiD· 1 shared Andrew S. P. LimiD· 1 shared Anne L. WheeleriD· 1 shared Anton GulkoiD· 1 shared Arnaud Le TroteriD· 1 shared Aron S. BuchmaniD· 1 shared Ashley D. HarrisiD· 1 shared Cassie Gross· 1 shared

Activity by Year

2020-2026 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 8 mutual co-author links

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1 shared paperNeuroscience

Andreea HertanuORCID

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Author profile →

4 papers

Recent·Most cited

The Canadian Pediatric Imaging Platform (C-PIP) Reference Sample: Neuroimaging Protocol and Cross-site Validation for Harmonized Multimodal Pediatric Imaging

Mervyn Singh, Shireen Parimoo, Vicente Enguix, Filomeno Cortese, Milton Camacho, Sean Spinney, Samantha Jane Lynch, Helen L. Carlson, Lara M. Leijser, Christine Lucas Tardif, Ilana Ruth Leppert, G. Bruce Pike, Emile Kadalie, Jamie Near, Chathura Kumaragamage, , Anne L. Wheeler

The paper describes the development of a harmonized multisite MRI protocol for pediatric brain imaging and validates its cross-site consistency.

bioRxiv · Oct 31, 2026 · PreprintNeuroscience

Standardization of postmortem human brainstem along the rostrocaudal axis to accommodate for heterogeneity in samples

Mayra Celada, Natasha Zaarour, Joni Cheung, Cassie Gross, Andrew S. P. Lim, Aron S. Buchman, Parastoo Saberi, Gopal Varma, Veronique VanderHorst

This paper standardizes postmortem human brainstem sampling along the rostrocaudal axis to reduce heterogeneity and improve reproducibility across studies.

bioRxiv · Mar 26, 2025 · PreprintNeuroscience

Single-nuclear transcriptomics of lymphedema-associated adipose reveals a pro-lymphangiogenic stromal cell population

Gregory P. Westcott, Margo P. Emont, Anton Gulko, Zhibo Zhou, Charissa R. Kim, Gopal Varma, Leo L. Tsai, Eliza O’Donnell, Zinger Yang, Wenle Liang, Christopher L. Jacobs, Linus T.-Y. Tsai, Timothy P. Padera, Dhruv Singhal, Evan D. Rosen

The paper uses single-nuclear RNA sequencing to analyze adipose tissue in lymphedema patients, identifying a stromal cell population that promotes lymphangiogenesis.

bioRxiv · Feb 18, 2025 · PreprintCell Biology

A Motion Correction Strategy for Multi-Contrast based 3D parametric imaging: Application to Inhomogeneous Magnetization Transfer (ihMT)

Lucas Soustelle, Julien Lamy, Arnaud Le Troter, Andreea Hertanu, Maxime Guye, Jean‐Philippe Ranjeva, Gopal Varma, David C. Alsop, Jean Pelletier, Olivier M. Girard, Guillaume Duhamel

The paper introduces a motion correction method for multi-contrast 3D imaging and shows it outperforms existing methods in reducing image misalignment.

bioRxiv · Sep 11, 2020 · PreprintNeuroscience