Erich J. Baker

Using Hierarchical Similarity To Examine The Genetics of Behcet's disease

This study uses hierarchical similarity to identify genetic factors of Behcet's disease and related autoimmune diseases with genetic overlap.

Finding human gene-disease associations using a Network Enhanced Similarity Search (NESS) of multi-species heterogeneous functional genomics data

This paper introduces NESS, a tool that improves gene-disease association discovery by leveraging multi-species functional genomics data and network analysis to overcome data sparsity and bias.

Systems genetic discovery of host-microbiome interactions reveals mechanisms of microbial involvement in disease

The paper identifies host-microbiome interactions using systems genetics in mice, revealing mechanisms of microbial involvement in disease.

Integration of heterogeneous functional genomics data in gerontology research identifies genes and pathway underlying aging across species

The paper integrates heterogeneous functional genomics data across species to identify genes and pathways underlying aging, finding Cd63 as a key gene with lifespan-extending effects in C. elegans.

Protein classification using modified n-gram and skip-gram models

This study introduces a modified N-Gram and Skip-Gram model for protein classification from primary sequence data, showing improved accuracy over existing methods.