Author

Jie Cheng

Johns Hopkins UniversityORCID 0000-0002-8835-3171Unclaimed ORCID profile · follow to get notified of new preprints

Additional preprints under this name without ORCID

Jie Cheng2 papers · AbbVie (United States)

Biology Disciplines

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Genomics· 2 Molecular Biology· 1

Signature Assays, Organisms & Methods

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Assay:bulk RNA-seq· 2 Research Focus:gene regulatory network inference· 2 Organism:human· 2 Approach:statistical model· 2 Assay:ATAC-seq· 1 Assay:CRISPR screen· 1 Research Focus:differential expression· 1 Approach:experimental assay· 1

Frequent Co-Authors

Cynthia A. BerlinickeiD· 2 shared Donald J. ZackiD· 2 shared Yukan DuaniD· 2 shared Casey J. KeuthaniD· 1 shared Derek S. WelsbieiD· 1 shared Guangyi FaniD· 1 shared Haiyang YuiD· 1 shared He ZhangiD· 1 shared

Activity by Year

2018-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 20 mutual co-author links

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2 shared papersMolecular Biology

Cynthia A. BerlinickeORCID

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3 papers

Recent·Most cited

Molecular BiologybioRxivPreprintJan 28, 2026

Identification a Compact Promoter using a New Promoter Selection Strategy and Engineering Hybrid Pol II/III Enable Efficient Genome Editing in Human Retinal Ganglion Cells

Pingwu Zhang, Steven H. Zhang, Yen-Yu Chang…·Donald J. Zack

The paper identifies a compact Pol II promoter and hybrid Pol II/III promoters to enable efficient single-AAV delivery of SpCas9 for genome editing in human retinal ganglion cells.

1 citation

humanCRISPR screen

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GenomicsMolecular Ecology ResourcesPeer-reviewedMay 11, 2019

A chromosome-level genome of black rockfish, Sebastes schlegelii, provides insights into the evolution of live birth

Yan He, Yue Chang, Lisui Bao…·Jie Qi

The paper presents a chromosome-level genome of black rockfish, identifies candidate genes related to viviparity, and proposes a reproductive model.

77 citationstop 1%

non-human primatebulk RNA-seq

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GenomicsbioRxivPreprintFeb 13, 2018

Axon Guidance Signaling Modulates Epithelial to Mesenchymal Transition in Stem Cell-Derived Retinal Pigment Epithelium

Srinivas R. Sripathi, Melissa M. Liu, Ming-Wen Hu…·Donald J. Zack

This study investigates EMT in stem cell-derived RPE cells, identifying dysregulated axon guidance molecules during the process.

1 citation

humanbulk RNA-seq

𝕏 PostBluesky