Author

Hejin Huang

GenentechORCID 0000-0002-9250-8797Unclaimed ORCID profile · follow to get notified of new preprints

Additional preprints under this name without ORCID

H. H. Huang2 papers

Biology Disciplines

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Genomics· 2 Immunology· 1

Signature Assays, Organisms & Methods

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Research Focus:cell-cell communication· 2 Organism:human· 2 Assay:spatial transcriptomics· 2 Approach:statistical model· 2 Approach:benchmark study· 1 Research Focus:benchmarking· 1 Assay:bulk RNA-seq· 1 Research Focus:cell signaling & trafficking· 1

Frequent Co-Authors

Shannon J. TurleyiD· 2 shared Sören MülleriD· 2 shared Sunny Z. WuiD· 2 shared Tommaso BiancalaniiD· 2 shared Aïcha BenTaiebiD· 1 shared Alberto GuarnieriiD· 1 shared Alma AnderssoniD· 1 shared Andy ZhouiD· 1 shared

Activity by Year

2025-2026 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 30 mutual co-author links

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2 shared papersImmunology

Shannon J. TurleyORCID

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3 papers

Recent·Most cited

RNAquarium: an archive-scale atlas of zebrafish gene expression coupled with pan-taxonomic profiling reveals diverse viral drivers of transcriptomic states

Yttria Aniseia, Eric Waltari, H. H. HUANG, Leandro Lima, Gibraan Rahman, Max Frank, Andy Zhou, Yang Joon Kim, Jacob Paras, Steven F. Baker, Yasin Şenbabaoğlu, Duo Peng, Keir M. Balla

RNAquarium integrates zebrafish and metatranscriptomic data to identify viral drivers of transcriptomic states and support foundation-model training.

bioRxiv · Jun 19, 2026 · PreprintGenomics

Fibroblastic FLT3L supports lymph node dendritic cells in the interfollicular niche

Sunny Z. Wu, Ryan S. Lane, Christopher Davidson, Ashley Byrne, Giulia Protti, Inés Marín, Endi K. Santosa, Alberto Guarnieri, Brandon D. Kayser, Hejin Huang, Katherine Williams, Matthew Fernandez, Jian Wei Jiang, Juan Zhang, Raymond Asuncion, , Shannon J. Turley

The paper identifies Grem1-expressing fibroblastic reticular cells as a source of FLT3L that supports dendritic cell homeostasis and function in lymph nodes.

Nature Immunology · Nov 17, 2025Peer-reviewedImmunology

Inferring cellular communication through mapping cells in space using Tangram 2

Hejin Huang, Alma Andersson, Sunny Z. Wu, Gabriele Scalia, Jenna L. Collier, Kam Hon Hoi, Sören Müller, Graham Heimberg, Héctor Corrada Bravo, Shreya Gaddam, Jan-Christian Hütter, Shannon J. Turley, David Richmond, Aïcha BenTaieb, Tommaso Biancalani

Tangram2 maps cell-to-cell communication by integrating spatial transcriptomics with single-cell RNA sequencing to identify gene expression changes driven by neighboring cell types.

bioRxiv · Sep 28, 2025 · PreprintGenomics