Author

Palaniraja Thandapani

NYU Langone HealthORCID 0000-0002-9881-3645Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Cancer Biology· 1 Genomics· 1

Signature Assays, Organisms & Methods

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Research Focus:drug response / drug discovery· 2 Organism:human· 2 Approach:deep learning· 1 Research Focus:gene regulatory network inference· 1 Approach:genetic perturbation / CRISPR· 1 Assay:Hi-C· 1 Research Focus:variant effect prediction· 1

Frequent Co-Authors

Aristotelis TsirigosiD· 2 shared Eric WangiD· 2 shared Iannis AifantisiD· 2 shared Bo XiaiD· 1 shared David FenyöiD· 1 shared Eleazar Vega‐Saenz de MieraiD· 1 shared Francesco E. BoccalatteiD· 1 shared Iman OsmaniD· 1 shared

Activity by Year

2023-2025 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 35 mutual co-author links

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2 shared papersCancer Biology

Aristotelis TsirigosORCID

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2 papers

Recent·Most cited

Cancer BiologyCancer Research CommunicationsPeer-reviewedJun 24, 2025

CRISPR-inhibition screen for lncRNAs linked to melanoma growth and metastasis

Stavroula Petroulia, Kathryn Hockemeyer, Shashank Tiwari…·Jochen Imig

The paper identifies lncRNAs involved in melanoma growth and metastasis using CRISPR-inhibition screens and validates their functional roles.

4 citations

humangenetic perturbation / CRISPR

𝕏 PostBluesky

GenomicsNature BiotechnologyPeer-reviewedJan 9, 2023

Cell type-specific prediction of 3D chromatin organization enables high-throughput in silico genetic screening

Jimin Tan, Nina Shenker-Tauris, Javier Rodriguez-Hernaez…·Aristotelis Tsirigos

This study introduces C.Origami, a deep learning model that predicts cell type-specific 3D chromatin organization, enabling in silico genetic screening to identify genomic regions affecting chromatin structure.

120 citationstop 1%

𝕏 PostBluesky