Author
University of PennsylvaniaORCID 0000-0003-1031-5535Unclaimed ORCID profile · follow to get notified of new preprints
6 papers
Recent·Most cited
Wojtek Bazant, Ann S. Blevins, Kathryn Crouch, Daniel P. Beiting
This paper introduces CORRAL, a tool for detecting eukaryotes in metagenomic data, showing it can identify novel strains and integrate with web-based analysis tools.
Emmanuel Marquez Legorreta, Lena Constantin, Marielle Piber…·Ethan K. Scott
The paper uses calcium imaging to study brain-wide visual habituation networks in zebrafish, finding altered network dynamics in fmr1 mutants linked to slower habituation.
Alec Helm, Ann S. Blevins, Danielle S. Bassett
The paper uses persistent homology to analyze the growth of the C. elegans connectome, revealing topological cavities and their sensitivity to neuron birth times.
Sydney M. Shaffer, Benjamin L. Emert, Raúl A. Reyes Hueros…·Arjun Raj
The paper introduces MemorySeq, a method to identify gene expression fluctuations persisting across cell divisions, revealing non-genetic, heritable cellular behaviors in cancer cell lines.
Robin M. Meyers, Jordan Bryan, James M. McFarland…·Aviad Tsherniak
The paper develops CERES, a computational method to correct copy-number effects in CRISPR-Cas9 essentiality screens, improving specificity in cancer cell line studies.
Ankit N. Khambhati, Ann E. Sizemore, Richard F. Betzel, Danielle S. Bassett
This paper reviews modeling approaches for dynamic brain networks and discusses statistical testing and interpretation of dynamic graph architecture.