Mateusz Sikora

The paper shows FG-NUPs in live cells exhibit liquid-like mobility, while in vitro they transition to solid, with O-GlcNAcylation and importin-β maintaining the dynamic FG network's liquidity.

This study refines the Martini force field to better model glycoprotein interactions by aligning simulations with experimental data on sugar-protein interactions.

The paper develops a robotic-inspired method to define the conformational space of the SARS-CoV-2 spike protein using DH parameters, showing improved distinction of conformations compared to spherical coordinates.

GlycoSHIELD is a pipeline that grafts glycan conformers onto protein structures to model glycan impact on protein dynamics and interactions.

The paper identifies an adhesion code in zebrafish neural progenitors that ensures robust stripe-like pattern formation during spinal cord morphogenesis.

This study uses cryo electron tomography and simulations to analyze the structure of SARS-CoV-2 spike protein in situ, revealing three hinges in the stalk domain that enable orientational flexibility.