Anton S. Petrov

This study analyzes mitoribosome protein composition across 85 eukaryotes to uncover evolutionary transitions and update nomenclature.

The paper reconstructs evolutionary rate trajectories of 528 genes from the Last Bacterial Common Ancestor across 2.1 billion years, identifying four clusters with distinct patterns linked to gene function and environmental changes.

The paper introduces TEDLH, a library of domain HMMs derived from TED annotations, enabling sensitive detection of remote homologues and expanding coverage of sequence space and CATH superfamily diversity.

RNAcentral integrates literature and gene-level data to enhance non-coding RNA sequence analysis and functional understanding.

R2DT is a software platform for visualizing RNA secondary structures with enhanced features like SNP display and template-free visualization.

The paper identifies BEAN and HABAS domains in bacterial RNA polymerase subunits, showing their evolutionary divergence and phylogenetic distribution.

This paper demonstrates the directed evolution of the Saccharomyces cerevisiae mitochondrial translation system as an orthogonal system to the cytosolic TS, revealing functional dependencies and enabling translation engineering.

RiboXYZ provides a database and tools for organizing, visualizing, and comparing ribosome structures from multiple sources with standardized nomenclature.

R2DT generates standardised 2D RNA structure diagrams for diverse ncRNA types using a template library, producing a large dataset of visualisations.