Author

Amanda Brooke Johnson

University of California, San FranciscoORCID 0000-0003-3519-8283Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Developmental Biology· 1 Genetics· 1

Signature Assays, Organisms & Methods

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Research Focus:cell type annotation· 2 Approach:experimental assay· 2 Organism:human· 2 Research Focus:differential expression· 1 Organism:mouse· 1 Assay:proteomics· 1 Research Focus:spatial domain detection· 1 Assay:spatial transcriptomics· 1

Frequent Co-Authors

Alex M. PlumiD· 1 shared Arun P. WiitaiD· 1 shared Idse HeemskerkiD· 1 shared Julia S. F. ChuiD· 1 shared LiAng YaoiD· 1 shared Margaret Lise GardeliD· 1 shared Mattia SerraiD· 1 shared Mercedes F. ParedesiD· 1 shared

Activity by Year

2022-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 20 mutual co-author links

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1 shared paperDevelopmental Biology

Alex M. PlumORCID

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2 papers

Recent·Most cited

Developmental BiologybioRxivPreprintOct 20, 2026

APLNR regulates directed migration to spatially pattern mesoderm in human gastruloids

Amanda Brooke Johnson, Shailaja Seetharaman, LiAng Yao…·Margaret Lise Gardel

This study identifies APLNR as a regulator of directed mesoderm migration in human gastruloids, showing chemotactic guidance through an epithelial ligand field.

DOI 10.64898/2026.10.19.760207

humanspatial transcriptomics

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GeneticsbioRxivPreprintJun 22, 2022

A CRISPR-engineered Isogenic Model Reveals Altered Neuronal Phenotypes of the 22q11.2 A-B Syndromic Deletion

Neha Paranjape, Yu-Hsiu Tony Lin, Quetzal Flores-Ramirez…·Arun P. Wiita

This study creates isogenic models of the 22q11.2 'A-B' deletion using CRISPR in iPS cells, revealing altered neuronal phenotypes through transcriptomic and proteomic analysis.

2 citations

humanmouse

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