Tao Yang

The paper presents a spatiotemporal transcriptome database of human embryogenesis, providing spatial gene expression and substructure data across 50 developing organs.

This study analyzes the genetic diversity of the deep sea, linking protein structures to genetic variants and identifying biotechnologically relevant features.

This study reconstructs 3D spatial transcriptomic models of planarians to map cell type distribution and positional gene regulation, identifying candidate genes involved in regeneration.

The paper introduces CIMA, a multi-omics atlas of human immune cells, identifying regulatory mechanisms and genetic associations across sex, age, and genetic factors.

This study constructs a 4D spatiotemporal transcriptomic map of planarian regeneration using Stereo-seq, identifying dynamic gradients and an injury-induced regenerative zone.

This study creates spatiotemporal transcriptomic maps of mouse brain after ICH to understand cellular responses and identify therapeutic targets.

The paper creates a single-cell atlas of amniote brains to study cell type diversification and identifies species-specific gene expression patterns and novel cell subtypes.

The paper constructs a multimodal brain cell atlas of adult macaques across their lifespan, revealing aging-related molecular changes and identifying aging hotspots and regulatory loci.

The paper constructs a 3D spatiotemporal multi-omics atlas of Drosophila development, revealing gene regulatory networks and cell type dynamics across embryogenesis to metamorphosis.

STOmicsDB provides a database for spatial transcriptomics data with tools for dataset visualization, publication search, and data archiving.

This study maps gene expression and developmental trajectories in zebrafish embryos using Stereo-seq and scRNA-seq, identifying spatial gene modules and signaling interactions.

CDCP is a platform for sharing and analyzing single-cell datasets, offering visualization and analysis tools for researchers.

This study identifies and characterizes salt stress-responsive lncRNAs in tomato roots, revealing their roles in stress response pathways and contributing to understanding salt tolerance mechanisms.

The paper uses Stereo-seq to map single-cell transcriptomes of axolotl telencephalon during development and regeneration, identifying a key radial glial cell subtype involved in early wound healing.

VirusDIP integrates and provides access to global viral sequence data for analysis and research.

CNSA provides a data repository for archiving omics data, including raw and analytical data, with a focus on data management and standardization.