Author
Université de SherbrookeORCID 0009-0001-9012-7245Unclaimed ORCID profile · follow to get notified of new preprints
4 papers
Recent·Most cited
Valeriia Vasylieva, Enrico Massignani, Tine Claeys, Francis Bourassa, Sébastien Leblanc, Ihor Arefiev, Lennart Martens, Marie A. Brunet
This paper demonstrates that using ionbot with OpenProt improves detection of non-canonical proteins by reducing FDR and increasing reproducibility compared to TPP.
bioRxiv · Aug 20, 2026 · PreprintMolecular Biology
Eric W. Deutsch, Leron W. Kok, Jonathan M. Mudge, Cristian Valls, Irwin Jungreis, Jorge Ruiz‐Orera, Zhi Sun, Ulrike Kusebauch, Ivo Fierro-Monti, Jennifer G. Abelin, M. Mar Albà, Julie L. Aspden, Sreejan Bandyopadhyay, Kaushik Banerjee, Pavel V. Baranov, , Sebastiaan van Heesch
The paper identifies 25% of 7,264 non-canonical open reading frames (ncORFs) as producing translated gene products, supported by over 3,000 peptides from 3.8 billion mass spectra.
Nature · May 6, 2026Peer-reviewedMolecular Biology
Véronique Gaudreault, Benoît Marchand, Raphaëlle Larcher, Sonya Nassari, Francis Bourassa, Mathilde Moreau, Dominique Jean, François‐Michel Boisvert, Marie A. Brunet, Steve Jean
The paper uses proximity labeling to identify proteins interacting with 23 human RAB GTPases, revealing novel functional connections and interactions.
Communications Biology · Nov 28, 2025Peer-reviewedCell Biology
Aaron C. Wacholder, Eric W. Deutsch, Leron W. Kok, Jip T. van Dinter, Jiwon Lee, James C. Wright, Sébastien Leblanc, Ayodya H Jayatissa, Kevin Jiang, Ihor Arefiev, Kevin Cao, Francis Bourassa, Félix-Antoine Trifiro, Michal Bassani‐Sternberg, Pavel V. Baranov, , Anne‐Ruxandra Carvunis
The paper assesses MS-based identifications of unannotated human microproteins, finding large variation in reported proteins and PSM quality across studies.
bioRxiv · Feb 19, 2025 · PreprintGenomics