Ihor Arefiev

This paper demonstrates that using ionbot with OpenProt improves detection of non-canonical proteins by reducing FDR and increasing reproducibility compared to TPP.

This study identifies genetic associations between COMT, ADH1B-ADH1C, and HTR2A loci and substance use disorders in Ukrainians, replicating some findings and providing new evidence for hallucinogen use.

The paper assesses MS-based identifications of unannotated human microproteins, finding large variation in reported proteins and PSM quality across studies.

PredictONCO is a web tool that predicts the impact of mutations in cancer-related proteins using structural and sequence-based features, achieving high accuracy in variant classification.

This paper presents a bioinformatics pipeline for analyzing missense mutations in oncogenic proteins, providing a probability score for functional impact and suggesting potential FDA/EMA-approved drugs.

The paper introduces a multiplexing strategy for scRNA-seq of adult mouse brain samples using anti-Thy1.2 antibodies and secondary oligonucleotide-labeled antibodies, enabling pooled sequencing with efficient demultiplexing and cost reduction.