bioRxivImmunologyPreprint
Shared Maturation Pathways of HIV-1 Envelope-reactive V3-glycan bnAb Lineages in Human and Rhesus Macaque
Matthew Clark, Hui LiiD, Mitchell Martin, Tyler D. EvangelousiD, S. GobeiliD, Madison BerryiD, Kshitij WaghiD, Elena E. GiorgiiD, Michael P. HogartyiD, Chengyan Zhao, Shuyi WangiD, Lorie MarchittoiD, Wenge Ding, Younghoon ParkiD, Juliette M. RandoiD, John W. CareyiD, Andrew Jesse ConnelliD, Ashwin N. SkellyiD, Yue CheniD, Seth Rohr, Chuancang Jiang, Sravani VenkatayogiiD, Katayoun MansouriiD, Robert J. EdwardsiD, Jared J. LindenbergeriD, , Wilton B. WilliamsiD
Abstract
ABSTRACTUnderstanding broadly neutralizing antibody (bnAb) lineage development in rhesus macaques (RMs) infected with Simian-HIV (SHIV) may inform HIV-1 vaccine designs. We analyzed HIV-1 envelope-antibody coevolution in 18 RMs infected by SHIV.BG505 (subtype A) and found highly conserved patterns of antibody recognition and Env escape, including in three animals that developed V3-glycan bnAbs. From one RM with V3-glycan targeted plasma breadth, we isolated 203 members of a single clonal Ab lineage designated DH1030. DH1030 Abs demonstrated striking genetic, functional and structural similarities with the human V3-glycan bnAb lineage DH270, which was isolated from an individual with subtype C HIV-1 CH848 infection. Notably, human-DH270 and macaque-DH1030 bnAbs shared early improbable mutations in HCDR2 that were critical for bnAb development. Thus, key improbable mutations and convergent patterns of antibody evolution and epitope recognition were shared across primate species and distinct HIV-1 subtypes, findings that may be leveraged in new HIV-1 vaccine designs. ONE SENTENCE SUMMARYBroadly neutralizing antibodies targeting HIV-1 envelope surface protein develop via a common maturation pathway across primate phylogeny.
- organism: human
- organism: rat
- assay: proteomics
- assay: structural biology
- research focus: cell type annotation
- research focus: clustering
- research focus: gene regulatory network inference
- approach: experimental assay
- approach: statistical model
- Citations
- 1
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