bioRxivBiophysicsPreprint
Human Stress Response Specificity through Biochemical Resonance Selectivity
Michael WorcesteriD, Shayan NejadiD, Arya Eimagh NaeiniiD, Surya Arian, Devin O’Donnell, Pratyasha Mishra, Siyu LiiD, Kevin Yang, Aisa Anbir, Matthew G. Guevara, Nina Y. Yuan, Seán E. O’LearyiD, Marcus KauliD, Roya ZandiiD, Thomas E. KuhlmaniD
Abstract
Bold First ParagraphIn eukaryotes, the mitogen activated protein kinase (MAPK) cascade, a multilayered interconnected network of enzymes, connects external stimuli to gene regulation, determining cellular fate 1. Environmental stress sensed by a cell starts a complex chain of reactions between MAPK enzymes that ultimately activates the master stress response regulator protein p38 MAPK 2,3. Thus activated, p38 must then selectively activate targets from a pool of hundreds to initiate appropriate cellular responses 3. Mechanisms for how p38 performs this selection remain unclear 4,5. Here we show that human p38 target selectivity is based on the same principles as modern electronic telecommunications systems, except using waves of chemicals rather than electromagnetic fields or electric currents. p38 encodes information about stimuli as different frequency oscillations of its activation state, and targets are selected through frequency-dependent resonance of oscillating biochemical reactions between p38 and its targets. We demonstrate this mechanism by activating various genetic responses in human cells by applying only sugar at different frequencies. These results unify observations of oscillating signaling components and altered responses 6-19 into a coherent framework to understand and control human gene expression. As failures of this mechanism may contribute to some p38-associated diseases 2,20-28, these findings may have implications for pharmaceutical development and therapeutic strategies.
- organism: human
- assay: proteomics
- research focus: cell signaling & trafficking
- approach: experimental assay
- Citations
- 0
Reproducibility ledger
Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.
Sign in to file a reproducibility report.
Related papers
- A rate threshold mechanism regulates MAPK stress signaling and survival
Amanda N. Johnson, Guoliang Li, … Gregor Neuert·Proceedings of the National Academy of SciencesPeer-reviewed·Dec 21, 2020
- Analysis and Design of Frequency-Based Biological Signaling Cascades
Arya Eimagh Naeini, Shayan Nejad, … Thomas E. Kuhlman·bioRxiv·Aug 24, 2026
- The MAP2Ks can use ADP to phosphorylate and activate their substrate MAPKs in vitro
P. Juyoux, J. von Velsen, … M. W. Bowler·bioRxiv·Feb 22, 2024
- Activation and regulation of a p38α MAPK by its downstream MAPKAP kinase through feedback phosphorylation and LLPS-driven condensate formation.
Pranita Ray, Chakshu Mangal, … Smarajit Polley·bioRxiv·Aug 1, 2024
- Architecture of the MKK6-p38α complex defines the basis of MAPK specificity and activation
P. Juyoux, I. Galdadas, … M. W. Bowler·bioRxiv·Jul 4, 2022
- Linear motif specificity in signaling through p38α and ERK2 mitogen-activated protein kinases
J. Torres Robles, G. Shi, B. E. Turk·bioRxiv·Aug 23, 2022