Proceedings of the National Academy of SciencesBiophysicsPeer-reviewed journal article
De novo Design of A Fusion Protein Tool for GPCR Research
Kaixuan GaoiD, Xin ZhangiD, Jia Nie, Hengyu Meng, Weishe ZhangiD, Boxue TianiD, Xiangyu LiuiD
Abstract
G protein-coupled receptors (GPCRs) play pivotal roles in cellular signaling and represent prominent drug targets. Structural elucidation of GPCRs is crucial for drug discovery efforts. However, structural studies of GPCRs remain challenging, particularly for inactive state structures, which often require extensive protein engineering. Here, we present a de novo design strategy termed "click fusion" for generating fusion proteins to facilitate GPCR structural studies. Our method involves the rational design of structurally stable protein domains rigidly linked to GPCRs. The resulting fusion protein enhances the thermostability of the target GPCR and aids in determining GPCR structures via cryo-electron microscopy (cryo-EM). We further demonstrate that the designed fusion protein can be transferred among structurally similar GPCRs with minor adjustments to the linker region. Our study introduces a promising approach for facilitating GPCR structural studies and advancing drug discovery efforts.
- assay: cryo-EM
- research focus: protein structure prediction
- research focus: drug response / drug discovery
- approach: deep learning
- approach: experimental assay
- Citations
- 8
- FWCI
- 1.99
- Field percentile
- top 13%
Reproducibility ledger
Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.
Sign in to file a reproducibility report.
Related papers
- A Rapid and Universal Pipeline for High-Resolution GPCR Structure Determination through In Silico Construct Optimization and de novo Protein Design
Asato Kojima, Kouki Kawakami, … Hideaki E. KATO·bioRxiv·Apr 6, 2026
- Designing Rigid Protein Fiducials to Visualize GPCR Conformational States
Alina Vo Vo, Yuan-En Sun, … Michael J. Robertson·bioRxiv·Jan 26, 2026
- Fusion protein strategies for cryo-EM study of G protein-coupled receptors
- Structure-guided optimization of light-activated chimeric G-protein coupled receptors
Alexandra‐Madelaine Tichy, Wang Lok So, … Harald Janovjak·StructurePeer-reviewed·May 18, 2022
- Extracellular Nanobody Screening using Conformationally Stable GPCR
Xin Zhang, Kaixuan Gao, … Xiangyu Liu·bioRxiv·Mar 25, 2025
- De novo design of miniprotein agonists and antagonists targeting G protein-coupled receptors
Edin Muratspahić, David Feldman, … David A. Baker·bioRxiv·Mar 23, 2025