bioRxivCell BiologyPreprint
Lipid rafts increase to facilitate ectoderm lineage specification of differentiating embryonic stem cells
C. Xu, B. Cao, Y.-d. Huo, G. Niu, M. Q. Zhang, Z.-l. Mai, X.-b. Lu, H.-b. Niu, D.-n. Chen, Y.-x. Ni
Abstract
Lipid rafts are packed nanoscopic domains on plasma membrane and essential signalling platforms for transducing extracellular stimuli into cellular responses. Although depletion of raft component glycoshpingolipids causes abnormality particularly in ectoderm layer formation, it remains unclear whether rafts play a role in lineage determination, a critical but less-known stage in lineage commitment. Here, inducing mouse embryonic stem cell (mESC) differentiation with retinoic acid (RA), we observed lipid rafts increased since early stage, especially in ectoderm-like cells. Stochastic optical reconstruction microscopy characterized at super-resolution the distinct raft features in mESCs and the derived differentiated cells. Furthermore, RA-induced commitment of ectoderm-like cells was significantly diminished not only by genetic ablation of rafts but by applying inhibitor for glycosphingolipids or cholesterol at early differentiation stages. Meanwhile, raft inhibition delayed RA-induced pluripotency exit, an early step required for differentiation. Therefore, lipid rafts increase and facilitate ectoderm lineage specification as well as pluripotency exit during mESC differentiation.
- organism: mouse
- assay: ATAC-seq
- assay: bulk RNA-seq
- research focus: cell type annotation
- research focus: development & morphogenesis
- approach: experimental assay
Reproducibility ledger
Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.
Sign in to file a reproducibility report.
Related papers
- Multi-layered regulation of neuroectoderm differentiation by retinoic acid in a primitive streak-like context
Luigi Russo, Hanna Lucie Sladitschek, Pierre A. Neveu·Stem Cell ReportsPeer-reviewed·Jan 20, 2022
- Direct quantification of ligand-induced lipid and protein microdomains with distinctive signaling properties
D. Wirth, M. Paul, … K. Hristova·bioRxiv·Sep 28, 2021
- Arp2/3 complex activity is necessary for mouse ESC differentiation, times formative pluripotency, and enables lineage specification
F. M. Aloisio, D. L. Barber·bioRxiv·Nov 2, 2021
- The lipid raft-linker gene Raftlin-2 is expressed in migrating neural crest cells
Mallorie P Jenne, Ilya Grabylnikov, Michael L. Piacentino·bioRxiv·Jun 12, 2026
- LSD1-mediated enhancer silencing enables endocrine cell development through attenuation of retinoic acid signalling.
Nicholas K. Vinckier, Nisha A. Patel, … Maike Sander·bioRxiv·Aug 1, 2019
- Positional cues underlie cell fate specification during branching morphogenesis of the embryonic mammary epithelium
Claudia Carabaña, Wenjie Sun, … Silvia Fré·The EMBO JournalPeer-reviewed·May 17, 2024