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BiochemistrybioRxiv
Preprint

Switching ON Hydrogen Sulfide: A Chemogenetic Toolkit for Spatially Resolved H2S Manipulation

Asal Ghaffari ZakiiD, Seyed Mohammad MiriiD, Emre VatandaşlariD, Sven VilainiD, Esra Nur Yi̇ği̇tiD, Mehmet Şerif AydıniD, Muhammed İkbal AlpiD, Emrah EroğluiD

Abstract

Hydrogen sulfide (H2S) is emerging as a multifaceted signalling molecule that shapes energy metabolism, vascular tone, cancer biology and neurodegeneration. Although fluorescent and genetically encoded sensors now allow real-time H2S imaging, tools for selective control of intracellular H2S remain scarce. Here we benchmark two substrate-based chemogenetic enzymes--the yeast D-amino-acid oxidase (mDAAO) and the Salmonella typhimurium D-cysteine desulfhydrase (stDCyD)--for controlled H2S production. Both enzymes catalyse the conversion of D-cysteine to H2S, yet only mDAAO concomitantly generates hydrogen peroxide, introducing an unwanted oxidative signal. In contrast, stDCyD produces exclusively H2S, thereby offering a clean and efficient means to elevate intracellular H2S in vitro. Our data position stDCyD as the superior chemogenetic actuator for dissecting H2S biology without confounding redox artefacts.

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