Author
W. Huang
Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.
Biology Disciplines
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2018-2024 · peak 36/yrCo-Author Collaboration Network
10 top collaborators · 27 mutual co-author links155 papers
Recent·Most cited
Fmo5 plays a sex-specific role in goblet cell maturation and mucus barrier formation
M. L. Schaller, M. M. Sykes, J. Mecano, S. Solanki, W. Huang, R. J. Rebernick, S. Beydoun, E. Wang, A. Bugarin-Lapuz, Y. M. Shah, S. F. Leiser
This study identifies Fmo5's sex-specific role in goblet cell maturation and mucus barrier formation in the intestine, with severe effects in female mice.
bioRxiv · Apr 5, 2024Physiology
A PTER-dependent pathway of taurine metabolism linked to energy balance
W. Wei, X. Lyu, A. L. Markhard, S. Fu, R. E. Mardjuki, P. E. Cavanagh, X. Zeng, J. Rajniak, N. Lu, S. Xiao, M. Zhao, M. Dolores Moya-Garzon, S. D. Truong, C. J. Chou, L. W. Wat, , J. Z. Long
This study identifies PTER as the taurine N-acetyltransferase/hydrolase, showing its role in regulating N-acetyltaurine levels and linking it to energy balance and metabolic phenotypes.
bioRxiv · Mar 21, 2024 · PreprintBiochemistry
Constitutive upregulation of transcription factors underlies permissive bradyzoite differentiation in a natural isolate of Toxoplasma gondii.
J. Xia, Y. Fu, W. Huang, L. D. Sibley
This paper identifies a Toxoplasma gondii isolate that constitutively expresses bradyzoite regulators and readily differentiates into mature bradyzoites under stress, providing a new in vitro model for studying chronic infection.
bioRxiv · Feb 28, 2024 · PreprintMicrobiology
Mendelian segregation and high recombination rates facilitate genetic analyses in Cryptosporidium parvum
A. Kimball, L. Funkhouser-Jones, W. Huang, R. Xu, W. H. Witola, L. D. Sibley
This study investigates meiotic processes in Cryptosporidium parvum by analyzing chromosome segregation and recombination rates using transgenic parasites and in vitro cultures, revealing Mendelian inheritance and high crossover rates.
bioRxiv · Feb 2, 2024 · PreprintMicrobiology
Complex life cycles and parasite-mediated trophic cascades drive species coexistence and the maintenance of genetic diversity
A. C. Hijar-Islas, N. V. Mon Pere, W. Huang, C. Eizaguirre
This study uses an individual-based model to show that parasite-mediated selection influences species coexistence and genetic diversity in predator-prey-parasite systems.
bioRxiv · Dec 22, 2023 · PreprintEcology
Chloroplast Methyltransferase Homolog RMT2 is Involved in Photosystem I Biogenesis
R. G. Kim, W. Huang, J. Findinier, F. Bunbury, P. Redekop, R. Shrestha, T. Grismer, J. Vilarrasa-Blasi, R. E. Jinkerson, N. Fakhimi, F. Fauser, M. C. Jonikas, M. Onishi, S.-L. Xu, A. R. Grossman
The paper identifies RMT2 as a chloroplast methyltransferase homolog involved in photosystem I biogenesis in Chlamydomonas reinhardtii through a high-throughput O2 sensitivity screen.
bioRxiv · Dec 21, 2023 · PreprintPlant Biology
Climate change has desynchronized insect and vegetation phenologies across Europe
Y. Huang, C. Yu, W. Huang, Y. Liu, M. Qi, J. Bai, Y. Dong, S. Gascoigne, P. Ciais, J. Penuelas, R. Salguero-Gomez
The paper examines phenological shifts in European vegetation and herbivorous insects over 34 years, finding that 61.2% have become asynchronous, with vegetation advancing faster than insects.
bioRxiv · Dec 11, 2023 · PreprintEcology
Cultivation of host-adapted Cryptosporidium parvum and Cryptosporidium hominis using enteroids for cryopreservation of isolates and transcriptomic studies of infection
M. Deng, T. Hou, X. Mao, J. Zhang, F. Yang, Y. Wei, Y. Tang, W. Zeng, W. Huang, N. Li, Y. Feng, L. Xiao, Y. Guo
This paper develops a method to cultivate and cryopreserve Cryptosporidium hominis and C. parvum using enteroids, showing improved transcriptomic responses compared to conventional cell systems.
bioRxiv · Dec 6, 2023 · PreprintMicrobiology
Mutation divergence over space in tumour expansion
H. Li, F. Tu, L. Deng, Z. Yang, X. Fu, L. Wang, D. GU, B. Werner, W. Huang
This study quantifies how mutation divergence varies with sampling distance and tumour expansion modes using simulations, showing that mutation rate inference is less accurate with smaller sampling sizes and slower expansion.
Journal of The Royal Society Interface · Nov 1, 2023Peer-reviewedCancer Biology
Parasite-mediated predation determines the infection in a complex predator-prey system
A. C. Hijar-Islas, A. Milne, C. Eizaguirre, W. Huang
This study investigates how parasite transmission through trophic interactions affects predator-prey dynamics, showing that stochasticity and infection probabilities influence species coexistence and population composition.
bioRxiv · Oct 29, 2023 · PreprintEcology
Immune Epitopes of SARS-CoV-2 Spike Protein and Considerations for Universal Vaccine Development
N. Magazine, T. Zhang, A. D. Bungwon, M. C. McGee, Y. Wu, G. Veggiani, W. Huang
This paper reviews immune epitopes of SARS-CoV-2 Spike protein and discusses their implications for universal vaccine development.
bioRxiv · Oct 26, 2023Immunology
Th2 and Th17-Associated Immunopathology Following SARS-CoV-2 Breakthrough Infection in Spike-vaccinated ACE2-humanized Mice
T. Zhang, N. Magazine, M. C. McGee, M. Carossino, G. Veggiani, K. G. Kousoulas, A. August, W. Huang
This study investigates VAERD risks in vaccinated mice following SARS-CoV-2 breakthrough infections, revealing Th2/Th17-driven pulmonary immunopathology.
bioRxiv · Oct 18, 2023Immunology
High-throughput single-cell sorting by stimulated Raman-activated cell ejection
J. Zhang, H. Lin, J. Xu, M. Zhang, X. Ge, C. Zhang, W. Huang, J.-X. Cheng
This paper introduces a high-throughput single-cell sorting platform using stimulated Raman-activated cell ejection, achieving high yield and purity in sorting polymer beads, bacteria, fungi, and tissue sections.
bioRxiv · Oct 16, 2023 · PreprintBioengineering
Redox Activated Substrates for Enhancing Activatable Cyclopropene Bioorthogonal Reactions
W.-S. Kao, W. Huang, Y. Zhang, A. Meyer, S. T. Laughlin
The paper identifies a cyclopropene-quinone pair that significantly enhances reactivity and demonstrates two activation mechanisms for bioorthogonal imaging.
bioRxiv · Oct 13, 2023Biochemistry
Anti-adipogenic properties of clock activator chlorhexidine and a new derivative
X. Xiong, T. Kiperman, W. Li, Z. Fang, A. Agua, W. Huang, D. Horne, K. Ma
This study identifies chlorhexidine and its derivative CM002 as clock activators with anti-adipogenic properties, showing they inhibit adipogenesis via Wnt pathway activation.
bioRxiv · Oct 12, 2023 · PreprintCell Biology
Clonal fitness decline in somatic differentiation hierarchies
I. Ahmed, D. Dingli, W. Huang, B. Werner
The paper shows clonal fitness declines over time in somatic differentiation hierarchies, observable in human haematopoiesis and CLL, with a 1/time relationship and equilibrium fitness.
bioRxiv · Sep 27, 2023 · PreprintCancer Biology
Negative allosteric modulation of the μ-opioid receptor
E. S. O'Brien, V. A. Rangari, A. El Daibani, S. O. Eans, B. White, H. Wang, Y. Shiimura, K. Krishna Kumar, K. Appourchaux, W. Huang, C. Zhang, J. M. Mathiesen, T. Che, J. P. McLaughlin, S. Majumdar, B. K. Kobilka
This paper identifies a negative allosteric modulator of the μ-opioid receptor that blocks agonist activity and enhances naloxone efficacy, offering potential for safer opioid overdose reversal.
bioRxiv · Sep 8, 2023 · PreprintBiochemistry
Oxidized LDL regulates efferocytosis through the CD36-PKM2-mtROS pathway
J. Zhang, J. Chang, V. Chen, M. A. Beg, W. Huang, L. Vick, Y. Wang, H. Zhang, E. Yttre, A. Gupta, M. Castleberry, Z. Zhang, W. Dai, S. Song, J. Zhu, , Y. Chen
This study identifies the CD36-PKM2-mtROS pathway as a mechanism by which oxidized LDL disrupts efferocytosis, contributing to atherosclerosis progression.
bioRxiv · Sep 7, 2023 · PreprintImmunology
In-situ Single-Molecule Investigations of the Impacts of Biochemical Perturbations on Conformational Intermediates of Monomeric α-Synuclein
W. Huang, S. Le, M. Yao, Y. Shi, J. Yan
This study uses in-situ single-molecule techniques to identify a partially folded conformation of α-synuclein and shows its sensitivity to biochemical perturbations and drugs.
bioRxiv · Aug 31, 2023Biophysics
Adaptive therapy achieves long-term control of chemotherapy resistance in high grade ovarian cancer
H. Hockings, E. Lakatos, W. Huang, M. Mossner, M. A. Khan, S. Metcalf, F. Nicolini, K. Smith, A.-M. Baker, T. Graham, M. Lockley
This study demonstrates that adaptive therapy reduces chemotherapy resistance in ovarian cancer by exploiting fitness costs of resistant cells, extending survival in mice and correlating with disease burden in patients.
bioRxiv · Jul 21, 2023 · PreprintCancer Biology
Coordinated inheritance of extrachromosomal DNA species in human cancer cells
K. L. Hung, M. G. Jones, I. T.-L. Wong, J. T. Lange, J. Luebeck, E. Scanu, B. J. He, L. Brückner, R. Li, R. C. Gonzalez, R. Schmargon, J. R. Dörr, J. A. Belk, V. Bafna, B. Werner, , H. Y. Chang
This study shows that multiple extrachromosomal DNA species are coordinately inherited in cancer cells through mitotic co-segregation, enabling oncogene cooperation and guiding therapeutic strategies.
bioRxiv · Jul 18, 2023 · PreprintCancer Biology
Tandemly duplicated MYB genes specifically in the Phaseoleae lineage are functionally diverged in the regulation of anthocyanin biosynthesis
R. Ma, W. Huang, Q. Hu, G. Tian, J. An, T. Fang, J. Liu, J. Hou, M. Zhao, L. Sun
The paper investigates functional divergence of tandemly duplicated MYB genes in soybean, showing they regulate anthocyanin biosynthesis differently in various tissues.
bioRxiv · Jul 15, 2023 · PreprintEvolutionary Biology
Structural insights into Rad18 targeting by the SLF1 BRCT domains
W. Huang, F. Qiu, L. Zheng, M. Shi, M. Shen, X. Zhao, S. Xiang
The paper presents the crystal structure of SLF1tBRCT bound to Rad18 peptide, revealing mechanisms of Rad18 recognition and BRCT-mediated complex assembly.
bioRxiv · Jun 23, 2023Biochemistry
Structural Basis for Regulated Assembly of the Mitochondrial Fission GTPase Drp1
K. Rochon, B. L. Bauer, N. A. Roethler, Y. Buckley, C.-C. Su, W. Huang, R. Ramachandran, M. S. K. Stoll, E. W. Yu, D. J. Taylor, J. A. Mears
This paper presents a cryo-EM structure of Drp1 dimer revealing conformational rearrangements that regulate its self-assembly and mitochondrial fission.
bioRxiv · Jun 22, 2023Cell Biology
Bimodular Architecture of Bacterial Effector SAP05 Drives Ubiquitin-Independent Targeted Protein Degradation
Q. Liu, A. Maqbool, F. G. Mirkin, Y. Singh, C. E. Stevenson, D. M. Lawson, S. Kamoun, W. Huang, S. A. Hogenhout
This paper reports the crystal structures of SAP05 complexes and reveals their bimodular architecture enabling ubiquitin-independent targeted protein degradation in eukaryotic cells.
bioRxiv · Jun 19, 2023Biochemistry
Pyranthiones/Pyrones: Click and Release Donors for Subcellular Hydrogen Sulfide Delivery and Labeling
W. Huang, J. Escorihuela, S. T. Laughlin
This paper introduces pyranthiones/pyrones as click and release donors for subcellular H2S delivery, showing enhanced reaction rates and efficient H2S release.
bioRxiv · Jun 19, 2023Biochemistry
Precision-engineered biomimetics: the human fallopian tube
A. J. Crawford, A. Forjaz, I. Bhorkar, T. Roy, D. Schell, V. Queiroga, K. Ren, D. Kramer, J. Bons, W. Huang, G. C. Russo, M.-H. Lee, B. Schilling, P.-H. Wu, I.-M. Shih, , D. Wirtz
The paper develops a precision-engineered multi-compartment organoid model of the human fallopian tube validated against a 3D single-cell reference map.
bioRxiv · Jun 6, 2023 · PreprintBioengineering
In vivo Ontogeny of human forebrain neural progenitor cell grafts in adult rats: an immunohistological study
C. Liu, A. Lin, Q. Xing, D. Zhang, W. Meng, R. Wu, H. Shi, W. Huang, X. Huang, D. Qin, X. Wang, X. Zhong, Y. Guo
This study tracks human neural progenitor cell grafts in adult rats up to 9 months, revealing their migration and differentiation patterns, and highlights their potential for neural repair.
bioRxiv · May 15, 2023 · PreprintCell Biology