An optimized method for gene knockdown in differentiating human and mouse adipocyte cultures
Abstract
Adipocyte cultures are a mainstay of metabolic disease research, yet loss-of-function studies in differentiating adipocytes is complicated by the refractoriness of lipid-containing adipocytes to standard siRNA transfections. Alternative methods, such as electroporation or adenovirus/lentivirus-based delivery systems are complex, expensive and often accompanied with unacceptable levels of cell death. To address this problem, we have tested two commercially available siRNA delivery systems in this study using a multi-parameter optimization approach. Our results identified a uniform siRNA transfection protocol that can be applied to human and mouse adipocyte cultures throughout the time course of differentiation, beginning with pre-differentiated cells and continuing up to lipid-accumulated differentiated adipocytes. Our findings allow for efficient transfection of human and mouse adipocyte cultures using standard and readily available methodologies, and should help significantly expand the scope of gene manipulation studies in these cell types.
02 /Specification & Classification
Click any tag to browse matching papers- Citations
- 0
- Organism
- Approach
Reproducibility ledger
Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.
Sign in to file a reproducibility report.
Related papers
- Single-cell transcriptome dataset of human and mouse in vitro adipogenesis models
J. Li, C. Jin, … J. W. Knowles·bioRxiv·Mar 27, 2023
- Hypertrophied human adipocyte spheroids as in vitro model of weight gain and adipose tissue dysfunction
A. Ioannidou, S. Alatar, … C. E. Hagberg·bioRxiv·Jan 6, 2021
- CROP-Seq: a single-cell CRISPRi platform for characterizing candidate genes relevant to metabolic disorders in human adipocytes
Ewa Bielczyk-Maczyńska, Disha Sharma, … Jiehan Li·bioRxiv·Jun 27, 2022
- Designer Fat Cells: Adipogenic Differentiation of CRISPR-Cas9 Genome-Engineered Induced Pluripotent Stem Cells
E. V. Ely, A. T. Kapinski, … K. H.-M. Collins·bioRxiv·Oct 26, 2023
- Transcriptomics informs design of a planar human enterocyte culture system that reveals metformin enhances fatty acid export
I. Gomez-Martinez, R. J. Bliton, … S. T. Magness·bioRxiv·Jan 24, 2022
- Development of a physiological insulin resistance model in human stem cell-derived adipocytes
M. Friesen, A. S. Khalil, … R. Jaenisch·Science AdvancesPeer-reviewed·Jun 17, 2022