Spaniel: analysis and interactive sharing of Spatial Transcriptomics data

Spatial Transcriptomics allows the sequencing of the complete transcriptomes from barcoded regions of intact tissue. The technology has the potential to answer a wide range of biological questions concerning cellular function, but analysis of the data presents a number of challenges which are not met by existing analysis tools. Here we present Spaniel, an R package providing a framework for analysing and sharing Spatial Transcriptomics data.