Structural Mechanism of Filamentation Induced Dampening of GTP Inhibition of Glutamate Dehydrogenase
Zelin ShaniD, Noura I. Darwish, Andres Rivero-GameziD, Timothy S. StrutzenbergiD, Dmitry LyumkisiD, Nancy C. HortoniD
Abstract
Glutamate dehydrogenase (GDH) is a highly regulated key enzyme that catalyzes the reversible oxidative deamination of glutamate to alpha-ketoglutarate, positioning it at a critical hub linking amino acid catabolism to energy production while supplying ammonia for urea synthesis and other nitrogen pathways. Early investigations have shown that bovine GDH (bGDH), which shares 98% sequence identity with its human homolog, assembles into polymeric filaments with altered allosteric responses. Filamentation has only relatively recently been appreciated as a widespread mechanism of enzyme regulation, prompting a reevaluation of these early observations in GDH. Here, we use high resolution cryogenic electron microscopy (cryo EM) to show that bGDH hexamers assemble via reciprocal antenna interactions that oppose the conformational changes associated with GTP inhibition, revealing how filamentation reshapes GDH allostery and with implications for the treatment of human disease.
02 /Specification & Classification
Click any tag to browse matching papers- Citations
- 1
- Assay
- Research Focus
- Approach
Reproducibility ledger
Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.
Sign in to file a reproducibility report.
Related papers
- Allosteric regulation of Glutamate dehydrogenase deamination activity
Soumen Bera, Mubasher Rashid, … Amit Chakraborty·Scientific ReportsPeer-reviewed·Oct 5, 2020
- Quaternary structure and activity of glutamate dehydrogenase are regulated by reversible S-palmitoylation and mitochondrial acyl-protein thioesterases.
Michael Salsaa, Huu Tram A Huynh, … Gregory D. Fairn·bioRxiv·Mar 25, 2026
- Tertiary and quaternary structure remodeling by occupancy of the substrate binding pocket in a large glutamate dehydrogenase
Melisa Lázaro, Nicolás Chamorro, … María‐Natalia Lisa·Protein SciencePeer-reviewed·Mar 25, 2026
- Conformational dynamics associated with remote residues regulate the kinetic properties of homologous glutamate dehydrogenases (GDHs)
Barsa Kanchan Jyotshna Godsora, Parijat Das, … Prasenjit Bhaumik·Protein SciencePeer-reviewed·Feb 21, 2025
- 3D architecture and structural flexibility revealed in the subfamily of large glutamate dehydrogenases by a mycobacterial enzyme
M. Lazaro, R. Melero, … M.-N. Lisa·Communications BiologyPeer-reviewed·Jun 3, 2021
- Product-stabilized filamentation by human glutamine synthetase allosterically tunes metabolic activity
Eric R. Greene, Richard Muniz, … James S. Fraser·eLifePeer-reviewed·Sep 25, 2026