bioRxivMicrobiologyPreprint
Profiling the effect of nafcillin on HA-MRSA D592 using bacteriological and physiological media
Y. Seif, S. Poudel, H. Tsunemoto, R. Szubin, M. J. Meehan, C. Olson, A. Rajput, G. Alarcon, A. Lamsa, N. Dillon, A. Vrbanac, J. Sugie, S. Daesh, J. Monk, P. Dorrestein, R. Knight, J. Pogliano, A. Feist, B. Palsson, V. Nizet
Abstract
Staphylococcus aureus is a leading human pathogen associated with both hospital-acquired and community-acquired infections. The bacterium has steadily gained resistance to {beta}-lactams and other important first-line antibiotics culminating in its categorization as an urgent threat by the U.S. Centers for Disease Control and Prevention. Observations of a varying response to antimicrobial exposure as a function of media type has revealed that clinical susceptibility testing performed in standard bacteriological media might not adequately represent pharmacological responses in the patient. Such observations have encouraged research designed to identify media types that more closely mimic the in vivo environment. In this study, we examine the response of a hospital-acquired USA100 lineage methicillin-resistant, vancomycin-intermediate S. aureus (MRSA/VISA) strain (D592) to nafcillin in a bacteriological compared to a more physiological tissue culture-based medium. We performed multi-dimensional analysis including growth and bacterial cytological profiling, RNA sequencing, and exo-metabolomics measurements (both HPLC and LC/MS) to shed light on the media-dependent activity of the commonly prescribed {beta}-lactam antibiotic nafcillin. O_TBL View this table: org.highwire.dtl.DTLVardef@85b95borg.highwire.dtl.DTLVardef@14c1504org.highwire.dtl.DTLVardef@1f7e976org.highwire.dtl.DTLVardef@100598dorg.highwire.dtl.DTLVardef@1f770e9_HPS_FORMAT_FIGEXP M_TBL C_TBL
- organism: human
- assay: bulk RNA-seq
- assay: metabolomics
- research focus: drug response / drug discovery
- approach: experimental assay
Reproducibility ledger
Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.
Sign in to file a reproducibility report.
Related papers
- Identifying the effect of vancomycin on HA-MRSA strains using bacteriological and physiological media
A. Rajput, S. Poudel, … B. O. Palsson·bioRxiv·May 6, 2020
- Uncovering the mechanisms of clinically-relevant altered antibiotic responses of Staphylococcus aureus under wound infection-mimetic conditions
Colin D. Rieger, Ali Molaeitabari, … Omar M. El-Halfawy·iSciencePeer-reviewed·Jun 1, 2026
- Does media matter? Growth environment influence antimicrobial tolerance and expression of virulence and transmembrane ion transport-associated genes in MRSA
Oluwatosin Qawiyy Orababa, Ayomikun Emmanuel Kade, Leonard Ighodalo Uzairue·bioRxiv·Jun 15, 2026
- Bicarbonate Resensitization of Methicillin-Resistant Staphylococcus aureus to β-Lactam Antibiotics
S. C. Ersoy, W. Abdelhady, … A. Bayer·bioRxiv·Mar 9, 2019
- Environmental conditions dictate differential evolution of vancomycin resistance in Staphylococcus aureus
H. Machado, Y. Seif, … A. M. Feist·bioRxiv·Jun 7, 2020
- Methicillin-Resistant Staphylococcus aureus has Phenotypic Variation in mecA Expression that Alters Antibiotic Sensitivity
Dongzhu Ma, Rekha Arya, … Kenneth L. Urish·Antimicrobial Agents and ChemotherapyPeer-reviewed·Feb 12, 2026