bioRxivImmunologyPreprint
Spatial mapping of human lung tissue reveals granuloma diversity and histopathological superstructure in tuberculosis
A. J. Sawyer, E. Patrick, J. Edwards, J. S. Wilmott, T. Fielder, Q. Yang, D. L. Barber, J. D. Ernst, W. J. Britton, U. Palendira, X. Chen, C. G. Feng
Abstract
The histopathological hallmark of tuberculosis (TB) is the formation of immune cell enriched aggregates called granulomas, but the scope of granuloma heterogeneity in human TB is unknown. By spatially mapping individual immune cells across large regions of TB lung tissue, we report that in addition to necrotizing granulomas, the human TB lung contains abundant non-necrotizing leukocyte aggregates surrounding areas of necrotizing tissue. These cellular lesions were more diverse in composition than necrotizing lesions and could be stratified into four general classes based on cellular composition and spatial distribution of B cells and macrophages, indicating there are foci of distinct immune reactions adjacent to necrotizing granulomas. We further show that the specific cellular composition of non-necrotizing structures correlates with their proximity to necrotizing lesions. Together, our study shows that during tuberculosis diseased lung tissue develops a histopathological superstructure comprising at least four different types of non-necrotizing cellular aggregates organized as satellites of necrotizing granulomas.
- organism: human
- assay: spatial transcriptomics
- research focus: cell type annotation
- research focus: spatial domain detection
- approach: experimental assay
Reproducibility ledger
Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.
Sign in to file a reproducibility report.
Related papers
- Tissue-wide profiling of human lungs reveals spatial sequestration of macrophages in tuberculosis
Wei Lie Xiao, Andrew J. Sawyer, … Xinchun Chen·bioRxiv·Apr 11, 2025
- A multicenter spatial transcriptomics atlas of human tuberculosis and non-tuberculous mycobacterial disease
Xun Jiang, Leonard Christian, … Yang Li·bioRxiv·Oct 17, 2025
- 3D microarchitecture of the human tuberculous granuloma
G. A. Wells, J. N. Glasgow, … A. J. Steyn·bioRxiv·Jun 14, 2020
- Single-Cell and Spatial Transcriptomic Analyses Deciphering the Three-Layer Architecture of Human Tuberculosis Granulomas
- Identification of a unique TUBB3+ cell population in the tuberculosis granuloma
Sarah Monard, Arnaud Métais, … Olivier Neyrolles·bioRxiv·Mar 4, 2025
- Spatial and temporal localization of immune transcripts defines hallmarks and diversity in the tuberculosis granuloma
B. Carow, T. Hauling, … M. E. Rottenberg·bioRxiv·Jan 2, 2019