bioRxivCancer BiologyPreprint
Transcriptional Regulation of Protein Synthesis by Mediator Kinase in MYC-driven Medulloblastoma
Dong Wang, Caitlin Ritz, Angela Pierce, Breauna BruntiD, Yuhuan Luo, Nathan Dahl, Sujatha VenkataramaniD, Etienne Danis, Kamil Kuś, Milena Mazan, Tomasz Rzymski, Bethany Veo, Rajeev VibhakariD
Abstract
MYC-driven medulloblastoma (MB) is a highly aggressive cancer type with poor prognosis and limited treatment options. Through CRISPR-Cas9 screening across MB cell lines, we identified the Mediator-associated kinase CDK8 as the top dependence for MYC-driven MB. Loss of CDK8 markedly reduces MYC expression and impedes MB growth. Mechanistically, we demonstrate that CDK8 depletion suppresses ribosome biogenesis and mRNA translation. CDK8 regulates occupancy of phospho-Polymerase II at specific chromatin loci facilitating an epigenetic alteration that promotes transcriptional regulation of ribosome biogenesis. Additionally, CDK8-mediated phosphorylation of 4EBP1 plays a crucial role in initiating eIF4E-dependent translation. Targeting CDK8 effectively suppresses cancer stem and progenitor cells, characterized by increased ribosome biogenesis activity. We also report the synergistic inhibition of CDK8 and mTOR in vivo and in vitro. Overall, our findings establish a connection between transcription and translation regulation, suggesting a promising therapeutic approach targets multiple points in the protein synthesis network for MYC-driven MB.
- organism: mouse
- assay: bulk RNA-seq
- research focus: cancer & tumor microenvironment
- research focus: cell signaling & trafficking
- research focus: gene regulatory network inference
- approach: experimental assay
- approach: genetic perturbation / CRISPR
Reproducibility ledger
Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.
Sign in to file a reproducibility report.
Related papers
- Midkine Dependency Defines a Therapeutically Actionable Vulnerability in Medulloblastoma
Sridharan Jayamohan, Prabhakar Pitta Venkata, … Gangadhara R. Sareddy·bioRxiv·Apr 14, 2026
- Targeting processive transcription for Myc-driven circuitry in medulloblastoma
Lays Martin Sobral, Faye M. Walker, … Nathan A. Dahl·Neuro-OncologyPeer-reviewed·May 12, 2025
- Transcriptional control of DNA repair networks by CDK7 regulates sensitivity to radiation in Myc-driven Medulloblastoma
B. L. Veo, E. Danis, … R. Vibhakar·Cell ReportsPeer-reviewed·Apr 1, 2021
- KDM2B is required for ribosome biogenesis and its depletion unequally affects mRNA translation
Vollter Anastas, Evangelia Chavdoula, … Philip N. Tsichlis·bioRxiv·May 22, 2024
- SETD8 inhibition targets cancer cells with increased rates of ribosome biogenesis
Matilde Murga, Gema López-Pernas, … Óscar Fernández-Capetillo·Cell Death and DiseasePeer-reviewed·Sep 28, 2024
- Distribution and vulnerability of transcriptional outputs across the genome in Myc-amplified medulloblastoma cells