bioRxivImmunologyPreprint
Activated fatty acid synthesis pathway in macrophages propagates pathogenic fibroblast expansion after myocardial infarction
Samreen SadafiD, Sathish Babu VasamsettiiD, Imran JamaliD, Ebin JohnyiD, Khadeja‐Tul Kubra, Shagufta HaqueiD, A.A.S. Rifat MannaniD, Babak RazaniiD, Srilakshmi ChaparalaiD, Satoshi OkawaiD, Partha DuttaiD
Abstract
Metabolic pathways, such as fatty acid oxidation and oxidative phosphorylation, can modulate inflammatory cells. However, little is known about the effects of the fatty acid synthesis pathway in macrophages on inflammation and cardiac remodeling after myocardial infarction (MI). Using spatial metabolomics, here we show that cardiac macrophages residing in the infarct synthesize de novo fatty acids and increase the production of fatty acid enzymes including ACLY and FASN. Mice deficient in myeloid Acly and Fasn have improved cardiac function after MI and reduced fibrosis. Combining Cleavage Under Targets and Release Using Nuclease (CUT&RUN), RNA sequencing analysis of Acly-/-macrophages, and macrophage-specific in vivo gene silencing, we demonstrate that ACLY acetylates the promoter region of the upstream regulator Krt17, which drives the production of pro-fibrotic cytokines, including IL-33. Single-cell RNA sequencing of cardiac fibroblasts shows that the expansion of a population of fibroblasts (Fibroblast 5) expressing high levels of extracellular matrix genes after MI is confined in the absence of macrophage Acly. Finally, the analysis of spatial multi-omics data of human hearts with MI uncovers myofibroblasts with the Fibroblast 5 gene signature. These myofibroblasts are located near cardiac macrophages expressing high levels of ACLY. In summary, we show that macrophage ACLY and FASN are deleterious in MI pathogenesis.
- organism: mouse
- organism: human
- assay: spatial transcriptomics
- assay: metabolomics
- assay: bulk RNA-seq
- research focus: cell type annotation
- research focus: cell-cell communication
- research focus: differential expression
- approach: experimental assay
- approach: statistical model
- Citations
- 2
Reproducibility ledger
Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.
Sign in to file a reproducibility report.
Related papers
- Targeting the Immune-Fibrosis Axis in Myocardial Infarction and Heart Failure
J. M. Amrute, X. Luo, … K. Lavine·bioRxiv·Oct 17, 2022
- Macrophages promote endothelial-to-mesenchymal transition via MT1-MMP/TGFβ after myocardial infarction
L. Alonso-Herranz, A. Sahun-Espanol, … M. Ricote·bioRxiv·Aug 7, 2020
- Circuit to target approach defines an autocrine myofibroblast loop that drives cardiac fibrosis
Shoval Miyara, Miri Adler, … Eldad Tzahor·Cell SystemsPeer-reviewed·Feb 18, 2025
- The pericardium promotes cardiac repair and remodelling post-myocardial infarction
K. J. Mylonas, L. H. Jackson-Jones, … C. A. Benezech·bioRxiv·Sep 18, 2019
- Adventitial leptin receptor-expressing fibroblasts are preferential contributors to fibrotic remodeling of the heart post infarction
Veronica Larcher, Ariane Fischer, … Nuno Guimarães‐Camboa·bioRxiv·Oct 14, 2025
- FYCO1 improves postischemic cardiac remodeling via enhanced autophagic flux and attenuation of proinflammatory signaling
Frauke Senger, Susanne S. Hille, … Norbert Frey·bioRxiv·Jul 8, 2026