bioRxivCell BiologyPreprint
Multimodal profiling establishes ovarian fibrosis as a measurable and targetable hallmark of human reproductive aging
Lydia M. HughesiD, Emily Zaniker-Gomez, Pooja Raj DevrukhkariD, Subhasri BiswasiD, Alexis Trofimchuk, Tomiris Atazhanova, Joan K. Riley, Anna Kleinhans, Man Zhang, Signe Holm NielseniD, Morten Karsdal, Michael B. StoutiD, Elnur BabayeviD, Francesca E. DuncaniD
Abstract
ABSTRACT Ovarian aging underpins infertility, systemic morbidity, and mortality in women. Stromal fibrosis is implicated in ovarian aging but has not been defined in the human ovary in situ. We integrated shear wave elastography (SWE), extracellular matrix (ECM) neoepitope fingerprinting, and singlecell RNA sequencing of follicular fluid aspirates within the same individual to comprehensively profile ovarian fibrosis. In an age-stratified cohort (37 years; N=32), age predicted ovarian stiffness, while mean stiffness was independently associated with reduced oocyte yield and follicular efficiency. ECM profiling revealed a dynamic fibrotic index favoring formation over degradation products. Single-cell transcriptomics demonstrated an age-associated fibroinflammatory stromal program enriched in pro-fibrotic pathways with stromal-immune crosstalk. In a larger validation cohort (25-45 years; N=100), age was similarly associated with ovarian stiffness. Thus, ovarian fibrosis is a quantifiable hallmark of human reproductive aging and represents a robust potential non-invasive biomarker and target for therapeutic intervention.
- organism: human
- assay: spatial transcriptomics
- assay: bulk RNA-seq
- research focus: cell type annotation
- research focus: differential expression
- research focus: cell-cell communication
- approach: experimental assay
- Citations
- 0
Reproducibility ledger
Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.
Sign in to file a reproducibility report.
Related papers
- Ovarian extracellular matrix mechanics regulate oocyte-follicle interactions during female reproductive aging
Xingyu Shen, Hao Wang, … Jennifer L. Young·Aging CellPeer-reviewed·Aug 1, 2026
- Age-associated increased stiffness of the ovarian microenvironment impairs follicle development and oocyte quality and rapidly alters follicle gene expression
Sara Pietroforte, Makenzie Plough, Farners Amargant·ReproductionPeer-reviewed·Jan 5, 2026
- Three-dimensional quantitative micro-elastography reveals alterations in spatial elasticity patterns of follicles and corpora lutea in murine ovaries during ageing
Anna Jaeschke, Matt S. Hepburn, … Chii Jou Chan·bioRxiv·Oct 8, 2024
- A single-cell atlas of the aging murine ovary
J. Isola, S. R. Ocanas, … M. Stout·bioRxiv·Apr 29, 2023
- Senescence-Linked Fibrosis in the Aging Human Ovary Revealed by p16-Based Histological Profiling and Spatial Transcriptomics
Mark A. Watson, Pooja Raj Devrukhkar, … Birgit Schilling·bioRxiv·Dec 8, 2025
- Systemic low-dose anti-fibrotic treatment attenuates ovarian aging in the mouse
Farners Amargant, Carol Magalhaes, … Francesca E. Duncan·GeroSciencePeer-reviewed·Sep 16, 2024