Author

A. A. Petti

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Cancer Biology· 2 Immunology· 2

Signature Assays, Organisms & Methods

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Research Focus:cell type annotation· 4 Research Focus:differential expression· 4 Organism:human· 4 Assay:scRNA-seq· 4 Research Focus:cell-cell communication· 3 Approach:deep learning· 3 Approach:statistical model· 3 Assay:CITE-seq· 1

Frequent Co-Authors

A. H. Kim· 2 shared A. Z. Wang· 2 shared B. Patel· 2 shared M. R. Chicoine· 2 shared S. M. Khan· 2 shared A. D. Sweeney· 1 shared A. J. Livingstone· 1 shared A. J. Patel· 1 shared

Activity by Year

2018-2023 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 31 mutual co-author links

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2 shared papersImmunology

A. H. Kim

Mutual co-authors in cluster

Author profile →

4 papers

Recent·Most cited

Glioblastoma-infiltrating CD8+ T cells are predominantly a clonally expanded GZMK+ effector population

A. Z. Wang, B. L. Mashimo, M. O. Schaettler, N. D. Sherpa, L. A. Leavitt, A. J. Livingstone, S. M. Khan, M. Li, M. Anzaldua-Campos, J. D. Bradley, E. C. Leuthardt, A. H. Kim, J. L. Dowling, M. R. Chicoine, P. S. Jones, , G. P. Dunn

The paper analyzes TILs in GBM using CITE-seq and scRNA-seq to show that CD8+ T cells are predominantly clonally expanded GZMK+ effector cells, lacking canonical exhaustion.

bioRxiv · Aug 25, 2023 · PreprintImmunology

Single-cell multi-omic analysis of the vestibular schwannoma ecosystem uncovers a nerve injury-like state

T. F. Barrett, B. Patel, S. M. Khan, A. K. Y. Yim, S. Pugazenthi, T. Mahlokozera, R. D. Z. Mullins, G. J. Zipfel, J. A. Herzog, M. R. Chicoine, C. C. Wick, N. Durakovic, J. W. Osbun, M. Shew, A. D. Sweeney, , A. H. Kim

The paper analyzes single-cell multi-omic data from vestibular schwannomas to identify a nerve injury-like state in tumor-associated Schwann cells linked to myeloid cell recruitment and tumor growth.

bioRxiv · Nov 18, 2022Cancer Biology

Single Cell Atlas of Human Dura Reveals Cellular Meningeal Landscape and Insights into Meningioma Immune Response

A. Z. Wang, J. Bowman-Kirigin, R. Desai, P. Patel, B. Patel, S. Khan, D. Bender, M. C. Marlin, J. Liu, J. Osbun, E. Leuthardt, M. Chicoine, R. Dacey, G. Zipfel, A. Kim, , G. Dunn

This study uses single-cell RNA-sequencing to characterize human dura and meningioma, revealing distinct immune microenvironments and TCR overlap between matched samples.

bioRxiv · Aug 3, 2021 · PreprintImmunology

Mutation detection in thousands of acute myeloid leukemia cells using single cell RNA-sequencing

A. A. Petti, S. R. Williams, C. A. Miller, I. T. Fiddes, S. N. Srivatsan, D. Y. Chen, C. C. Fronick, R. S. Fulton, D. M. Church, T. J. Ley

This paper links subclonal mutations to transcriptional profiles in AML using integrated single-cell RNA-sequencing and whole genome sequencing.

bioRxiv · Oct 17, 2018 · PreprintCancer Biology