Author

A. Basu

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioengineering· 7 Evolutionary Biology· 7 Cancer Biology· 6 Microbiology· 5 Biophysics· 4 Immunology· 3

Signature Assays, Organisms & Methods

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Approach:experimental assay· 22 Organism:human· 13 Approach:statistical model· 11 Research Focus:cell type annotation· 10 Research Focus:host-pathogen & immune response· 10 Approach:deep learning· 7 Organism:Drosophila· 6 Research Focus:differential expression· 5

Frequent Co-Authors

A. Singh· 6 shared N. G. Prasad· 6 shared C. Libedinsky· 4 shared R. So· 4 shared S. Shaikh· 4 shared T. Sibindi· 4 shared S. Pott· 3 shared T. Ha· 3 shared

Activity by Year

2019-2024 · peak 14/yr

Co-Author Collaboration Network

10 top collaborators · 10 mutual co-author links

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6 shared papersEvolutionary Biology

A. Singh

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36 papers

Recent·Most cited

Sparse Ensemble Machine Learning to improve robustness of long-term decoding in iBMIs

S. Shaikh, R. So, T. Sibindi, C. Libedinsky, A. Basu

This paper introduces a sparse ensemble machine learning method to improve decoding robustness in iBMIs by reducing sensitivity to recording channel variations, achieving up to 24% accuracy improvement in non-human primates.

bioRxiv · Nov 7, 2019Bioengineering

Towards Intelligent Intra-cortical BMI (i2BMI):Low-power Neuromorphic Decoders that outperform Kalman Filters

S. Shaikh, R. So, T. Sibindi, C. Libedinsky, A. Basu

This paper introduces a low-power neuromorphic decoder, SELMA, which outperforms Kalman filters in continuous state decoding for intra-cortical BMI systems.

bioRxiv · Sep 20, 2019Bioengineering

Single Photon, Time-Gated, Phasor-based Fluorescence Lifetime Imaging Through Highly Scattering Medium

R. Ankri, A. Basu, A. C. Ulku, C. Bruschini, E. Charbon, S. Weiss, X. Michalet

This paper develops a time-gated single-photon fluorescence lifetime imaging method to overcome scattering and autofluorescence in vivo.

bioRxiv · Jun 28, 2019Bioengineering

Novel strategy for treating neurotropic viral infections using hypolipidemic drug Atorvastatin

S. Mallick, S. Chakraborty, B. Hazra, S. Dev, S. Mukherjee, M. A. Wani, A. Basu

This study investigates the antiviral effects of atorvastatin against Chandipura and Japanese Encephalitis viruses, showing reduced viral replication and neuronal damage through hnRNPC-dependent mechanisms.

bioRxiv · May 17, 2019 · PreprintMicrobiology

Identification and classification of hubs in miRNA target gene networks in human neural stem/progenitor cells following Japanese encephalitis virus infection

S. Mukherjee, I. Akbar, R. Bhagat, B. Hazra, A. Bhattacharyya, P. Seth, D. Roy, A. Basu

The paper identifies and classifies hub genes in miRNA target networks of human neural stem/progenitor cells infected with Japanese encephalitis virus.

bioRxiv · Mar 20, 2019Microbiology

Harnessing patient-specific response dynamics to optimize evolutionary therapies for metastatic clear cell renal cell carcinoma - Learning to adapt

I. C. Sorribes, A. Basu, R. Brady, P. M. Enriquez-Navas, X. Feng, J. N. Kather, N. Nerlakanti, R. Stephens, M. Strobl, I. Tavassoly, N. Vitos, D. Lemanne, B. Manley, C. O'Farrelly, H. Enderling

This paper develops a dynamic tumor-immune model to predict patient response to treatment using NLR as a biomarker and simulates optimal therapies for virtual RCC patients.

bioRxiv · Feb 28, 2019 · PreprintCancer Biology