Author

A. J. Bogdanove

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Plant Biology· 6 Microbiology· 2 Pathology· 1

Signature Assays, Organisms & Methods

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Approach:experimental assay· 7 Research Focus:cell type annotation· 4 Research Focus:host-pathogen & immune response· 4 Organism:plant (other)· 4 Research Focus:gene regulatory network inference· 3 Organism:Arabidopsis· 2 Organism:bacteria (other)· 2 Assay:bulk RNA-seq· 2

Frequent Co-Authors

S. C. D. Carpenter· 4 shared A. C. Read· 3 shared J. E. Leach· 3 shared L. Wang· 3 shared M. E. Carter· 3 shared B. Szurek· 2 shared F. C. Rinaldi· 2 shared M. Hutin· 2 shared

Activity by Year

2018-2024 · peak 3/yr

Co-Author Collaboration Network

10 top collaborators · 24 mutual co-author links

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4 shared papersMicrobiology

S. C. D. Carpenter

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Author profile →

9 papers

Recent·Most cited

Prevalence and diversity of TAL effector-like proteins in fungal endosymbiotic Mycetohabitans spp.

S. C. D. Carpenter, A. J. Bogdanove, B. Abbot, J. E. Stajich, J. Uehling, B. Lovett, M. T. Kasson, M. E. Carter

This study identifies and characterizes Btl proteins in Mycetohabitans spp., showing sequence and functional diversity across strains and suggesting their role in bacterial-fungal symbiosis.

Microbial Genomics · Jun 11, 2024Peer-reviewedMicrobiology

TAL effectors with avirulence activity in African strains of Xanthomonas oryzae pv. oryzae

M. Lachaux, E. Thomas, A. J. Bogdanove, B. Szurek, M. Hutin

The paper identifies and characterizes two TALEs, TalD and TalI, from an African Xanthomonas oryzae pv. oryzae strain that act as avirulence factors in rice.

bioRxiv · Oct 21, 2021Plant Biology

Spelling changes and fluorescent tagging with prime editing vectors for plants

L. Wang, H. B. Kaya, N. Zhang, R. Rai, M. R. Willmann, S. C. D. Carpenter, A. C. Read, F. Martin, Z. Fei, J. E. Leach, G. B. Martin, A. J. Bogdanove

This paper develops and validates prime editing vectors for plants, enabling large insertions and fluorescent tagging in dicots and monocots.

bioRxiv · Jul 16, 2020Plant Biology

Cloning of the rice Xo1 resistance gene and interaction of the Xo1 protein with the defense-suppressing Xanthomonas effector Tal2h

A. C. Read, M. C. Hutin, M. J. Moscou, F. C. Rinaldi, A. J. Bogdanove

This study identifies the Xo1 resistance gene in rice and shows its interaction with the Xanthomonas effector Tal2h, revealing a mechanism of defense suppression.

bioRxiv · May 26, 2020Plant Biology

A TAL effector-like protein of symbiotic Mycetohabitans increases stress tolerance and alters the transcriptome of the fungal host Rhizopus microsporus

M. E. Carter, S. C. D. Carpenter, Z. E. Dubrow, M. R. Sabol, F. C. Rinaldi, O. A. Lastovetsky, S. J. Mondo, T. E. Pawlowska, A. J. Bogdanove

The paper identifies a bacterial TAL-like effector that alters the transcriptome of its fungal host and enhances stress tolerance.

bioRxiv · Mar 4, 2020Microbiology

Genome assembly and characterization of a complex zfBED-NLR gene-containing disease resistance locus in Carolina Gold Select rice with Nanopore sequencing

A. C. Read, M. J. Moscou, A. V. Zimin, G. Pertea, R. S. Meyer, M. D. Purugganan, J. E. Leach, L. R. Triplett, S. L. Salzberg, A. J. Bogdanove

The paper uses long-read sequencing to assemble and characterize a complex NLR gene-containing locus in rice, identifying an expanded Xo1 locus with a zfBED domain-containing NLR gene.

bioRxiv · Jun 20, 2019Plant Biology

A strain of an emerging Indian pathotype of Xanthomonas oryzae pv. oryzae defeats the rice bacterial blight resistance gene xa13 without inducing a clade III SWEET gene and is nearly identical to a recent Thai isolate

S. Carpenter, P. Mishra, C. Ghoshal, P. Dash, L. Wang, S. Midha, G. S. Laha, J. Lore, W. Kositratana, N. Singh, K. Singh, P. Patil, R. Oliva, S. Patarapuwadol, A. J. Bogdanove, R. Rai

The paper identifies an Xoo strain that bypasses xa13 resistance by not inducing clade III SWEET genes and is nearly identical to a Thai isolate.

bioRxiv · Aug 6, 2018Pathology

Convergent evolution of effector protease recognition by Arabidopsis and barley

M. E. Carter, M. Helm, A. Chapman, E. Wan, A. M. Restrepo Sierra, R. W. Innes, A. J. Bogdanove, R. P. Wise

This study identifies convergent evolution of AvrPphB recognition in barley and wheat through Pbr1, a novel NLR gene that detects protease activity similar to Arabidopsis RPS5.

bioRxiv · Jul 26, 2018Plant Biology

Functional analysis of African Xanthomonas oryzae pv. oryzae TALomes reveals a new susceptibility gene in bacterial leaf blight of rice

T. T. Tran, A. L. Perez-Quintero, I. Wonni, S. C. D. Carpenter, Y. Yu, L. Wang, J. E. Leach, V. Verdier, S. Cunnac, A. J. Bogdanove, R. Koebnik, M. Hutin, B. Szurek

The paper identifies a new susceptibility gene in rice by analyzing TAL effector repertoires and their functional roles in bacterial leaf blight.

bioRxiv · Feb 8, 2018Plant Biology