Author

A. Jalali

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Cancer Biology· 4

Signature Assays, Organisms & Methods

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Research Focus:differential expression· 4 Organism:human· 4 Research Focus:cell type annotation· 3 Approach:statistical model· 3 Assay:bulk RNA-seq· 2 Approach:experimental assay· 2 Research Focus:gene regulatory network inference· 2 Research Focus:cell-cell communication· 1

Frequent Co-Authors

G. Rao· 3 shared B. Deneen· 2 shared B. Lozzi· 2 shared E. Luna-Figueroa· 2 shared P. He· 2 shared Y. Ko· 2 shared Z.-F. Lee· 2 shared A. Cervantes· 1 shared

Activity by Year

2018-2023 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 29 mutual co-author links

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3 shared papersCancer Biology

G. Rao

Mutual co-authors in cluster

Author profile →

4 papers

Recent·Most cited

Remote neuronal activity drives glioma infiltration via Sema4f

E. Huang-Hobbs, Y.-T. Cheng, Y. Ko, E. Luna-Figueroa, B. Lozzi, K. Taylor, M. McDonald, P. He, H.-C. Chen, Y. Yang, E. Maleki, Z.-F. Lee, S. Murali, M. Williamson, D. Choi, , B. Deneen

This study identifies callosal projection neurons as drivers of glioma infiltration through Sema4F-mediated activity-dependent signaling in mouse and human tumors.

bioRxiv · Mar 15, 2023 · PreprintCancer Biology

Identification of functional immune and neuronal tumor cells in glioma

R. N. Curry, M. F. McDonald, Q. Ma, J. Meyer, I. Aiba, B. Lozzi, A. Cervantes, Y. Ko, E. Luna-Figueroa, D.-J. Choi, Z.-F. Lee, J. Jing, A. O. Harmanci, A. Rosenbaum, P. He, , A. Serin Harmanci

The paper introduces SCRAM, a tool that identifies tumor-specific cell types in glioma with functional properties similar to non-tumor cells.

bioRxiv · Nov 5, 2022 · PreprintCancer Biology

Molecular profiling predicts meningioma recurrence and reveals loss of DREAM complex repression in aggressive tumors

A. J. Patel, Y.-W. Wan, R. Al-Ouran, J.-P. Revelli, M. F. Cardenas, M. Oneissi, L. Xi, A. Jalali, J. Magnotti, D. M. Muzny, H. Doddapaneni, S. Sebastian, K. A. Heck, J. C. Goodman, S. P. Gopinath, , T. J. Klisch

This study identifies three molecular types of meningiomas that better predict recurrence than WHO grading and links aggressive tumors to loss of DREAM complex repression.

bioRxiv · Sep 10, 2019Cancer Biology

Bacteria-to-human protein networks reveal origins of endogenous DNA damage

J. Xia, L.-Y. Chiu, R. B. Nehring, M. A. Bravo Nunez, Q. Mei, M. Perez, Y. Zhai, D. M. Fitzgerald, J. P. Pribis, Y. Wang, C. W. Hu, R. T. Powell, S. A. LaBonte, A. Jalali, M. L. Matadamas Guzman, , S. M. Rosenberg

The paper identifies DNA-damaging proteins in E. coli and their human homologs, showing they promote endogenous DNA damage and are overrepresented in cancer drivers.

bioRxiv · Jun 26, 2018Cancer Biology