Author

A. Karlstrom

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Cancer Biology· 2 Pathology· 1 Plant Biology· 1

Signature Assays, Organisms & Methods

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Approach:statistical model· 4 Assay:bulk RNA-seq· 2 Research Focus:cell type annotation· 2 Research Focus:differential expression· 2 Organism:human· 2 Organism:plant (other)· 2 Assay:scRNA-seq· 2 Assay:DNA methylation· 1

Frequent Co-Authors

A. G. Patel· 2 shared B. A. Orr· 2 shared C. Reilly· 2 shared H. M. Cockerton· 2 shared M. R. Clay· 2 shared R. J. Harrison· 2 shared X. Huang· 2 shared A. J. Passey· 1 shared

Activity by Year

2018-2024 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 20 mutual co-author links

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2 shared papersCancer Biology

A. G. Patel

Mutual co-authors in cluster

Author profile →

4 papers

Recent·Most cited

A spatial cell atlas of neuroblastoma reveals developmental, epigenetic and spatial axis of tumor heterogeneity

A. G. Patel, O. Ashenberg, N. B. Collins, A. Segerstolpe, S. Jiang, M. Slyper, X. Huang, C. Caraccio, H. Jin, H. Sheppard, K. Xu, T.-C. Chang, B. A. Orr, A. Shirinifard, R. H. Chapple, , S. J. Rodig

This paper creates a spatial cell atlas of neuroblastoma, revealing tumor heterogeneity through multi-omics data and identifying spatial compartmentalization and signaling patterns.

bioRxiv · Jan 7, 2024 · PreprintCancer Biology

The Myogenesis Program Drives Clonal Selection and Drug Resistance in Rhabdomyosarcoma

A. G. Patel, X. Chen, X. Huang, M. R. Clay, N. Komarova, M. J. Krasin, A. Pappo, H. Tillman, B. A. Orr, J. McEvoy, B. Gordon, K. Blankenship, C. Reilly, X. Zhou, J. L. Norrie, , M. A. Dyer

This study shows that targeting developmental states in rhabdomyosarcoma can prevent disease recurrence by eliminating myoblast-like cells and inhibiting EGFR-dependent paraxial mesoderm populations.

bioRxiv · Jun 16, 2021Cancer Biology

The Genetic Architecture of Strawberry Yield and Fruit Quality Traits

H. M. Cockerton, A. Karlstrom, A. Johnson, B. M. Li, E. Stavridou, K. Hopson, A. Whitehouse, R. J. Harrison

This study identifies genetic factors influencing strawberry yield and quality traits, finding a trade-off between sugar content and yield and recommending trait selection strategies for breeding.

bioRxiv · Jun 13, 2021 · PreprintPlant Biology

Identification of powdery mildew resistance QTL in Fragaria x ananassa

H. M. Cockerton, R. J. Vickerstaff, F. Wilson, A. Karlstrom, M. Sobczyk, A. J. Passey, J. Q. He, K. J. McLeary, D. J. Sargent, K. Pakozdi, N. Harrison, M. Lumbreras Martinez, L. Antanaviciute, D. W. Simpson, R. J. Harrison

This study identifies multiple QTL associated with powdery mildew resistance in strawberry, including stable and transient loci, and suggests their use in marker-assisted breeding.

bioRxiv · Jan 18, 2018Pathology