Author

A. Shirinifard

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

Click to filter author papers

Cell Biology· 2 Cancer Biology· 1

Signature Assays, Organisms & Methods

Click to filter · or open tag

Approach:experimental assay· 2 Research Focus:spatial domain detection· 2 Assay:bulk RNA-seq· 1 Research Focus:cell type annotation· 1 Research Focus:cell-cell communication· 1 Research Focus:differential expression· 1 Assay:DNA methylation· 1 Assay:electronic health records· 1

Frequent Co-Authors

C.-L. Chang· 2 shared D. R. Stabley· 2 shared A. Carisey· 1 shared A. G. Patel· 1 shared A. G. Tebo· 1 shared A. Karlstrom· 1 shared A. Lako· 1 shared A. Rotem· 1 shared

Activity by Year

2019-2024 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 21 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

2 shared papersCell Biology

C.-L. Chang

Mutual co-authors in cluster

Author profile →

3 papers

Recent·Most cited

A spatial cell atlas of neuroblastoma reveals developmental, epigenetic and spatial axis of tumor heterogeneity

A. G. Patel, O. Ashenberg, N. B. Collins, A. Segerstolpe, S. Jiang, M. Slyper, X. Huang, C. Caraccio, H. Jin, H. Sheppard, K. Xu, T.-C. Chang, B. A. Orr, A. Shirinifard, R. H. Chapple, , S. J. Rodig

This paper creates a spatial cell atlas of neuroblastoma, revealing tumor heterogeneity through multi-omics data and identifying spatial compartmentalization and signaling patterns.

bioRxiv · Jan 7, 2024 · PreprintCancer Biology

A fluorogenic complementation tool kit for interrogating lipid droplet-organelle interaction

X. Li, R. Gamuyao, M.-L. Wu, W. J. Cho, N. B. Kurtz, S. V. King, R. A. Petersen, D. R. Stabley, C. Lindow, L. Climer, A. Shirinifard, F. Ferrara, R. E. Throm, C. G. Robinson, A. Carisey, , C.-L. Chang

This paper introduces FABCON, a tool for detecting lipid droplet-organelle contact sites in living cells, showing their dynamic behavior under different metabolic conditions.

bioRxiv · Nov 29, 2023Cell Biology

Correlative three-dimensional super-resolution and block face electron microscopy of whole vitreously frozen cells

D. P. Hoffman, G. Shtengel, C. S. Xu, K. R. Campbell, M. Freeman, L. Wang, D. E. Milkie, H. A. Pasolli, N. Iyer, J. A. Bogovic, D. R. Stabley, A. Shirinifard, S. Pang, D. Peale, K. Schaefer, , H. F. Hess

This study develops a platform for 3D correlative cryogenic super-resolution and block-face EM of whole vitreously frozen cells, revealing new protein-ultrastructure relationships.

bioRxiv · Sep 18, 2019Cell Biology