A. Skirycz

Identification of cell-type-specific response to silicon treatment in soybean leaves through single nucleus RNA-sequencing

This study uses snRNA-seq to identify cell-type-specific responses to silicon treatment in soybean leaves, revealing novel Si-induced cell clusters and gene expression changes related to defense mechanisms.

The transcription factor ATML1 maintains giant cell identity by inducing synthesis of its own (very) long-chain fatty acid-containing ligands

The paper shows that high ATML1 concentrations induce VLCFA synthesis, which maintains giant cell identity by promoting auto-activation through lipid ligand binding.

Mapping protein-metabolite interactions in E. coli by integrating chromatographic techniques and co-fractionation mass spectrometry.

The paper introduces PROMIS, a co-fractionation mass spectrometry technique integrated with chromatographic methods to map protein-metabolite interactions in E. coli, identifying 994 interactions and revealing novel functional insights.

Characterization of tomato canal-1 mutant using a multi-omics approach

The paper characterizes the tomato canal-1 mutant using multi-omics data, showing that green leaves compensate for impaired SCO2 function through transcriptional upregulation, while white leaves fail to compensate and exhibit stress responses.

The genetic and physiological basis of Arabidopsis thaliana tolerance to Pseudomonas viridiflava

This study investigates how Arabidopsis thaliana responds to Pseudomonas viridiflava infection, finding that the JA/ethylene pathway influences susceptibility and that immune responses vary between accessions.

The K+ exchange antiporter 3 senses the chloroplast energy status to synchronize photosynthesis

The paper identifies KEA3's RCT domain as a sensor for chloroplast energy status, linking it to photosynthetic synchronization through phosphorylation and redox potential.

Regulation of a single Inositol 1-Phosphate Synthase homeolog by HSFA6B contributes to fiber yield maintenance under drought conditions in upland cotton

The paper identifies a regulatory mechanism linking drought stress and fiber yield in upland cotton through the interaction of GhHSFA6B-D and GhIPS1-A, showing conservation in Arabidopsis.

A novel role of 3,5-cAMP in the regulation of actin cytoskeleton in Arabidopsis.

This study identifies 3,5-cAMP's role in regulating the actin cytoskeleton in Arabidopsis by modulating calcium signaling and actin-binding proteins.

A ROS-Ca2+ signalling pathway identified from a chemical screen for modifiers of sugar-activated circadian gene expression.

The paper identifies a ROS-Ca2+ signalling pathway through a chemical screen that modifies sugar-activated circadian gene expression in plants.

Arabidopsis PROTODERMAL FACTOR2 binds lysophosphatidylcholines and transcriptionally regulates phospholipid metabolism

This study shows that PDF2, an HD-Zip IV TF, binds lysophosphatidylcholines via its START domain and regulates phospholipid metabolism in response to phosphate availability.

Association of the malate dehydrogenase-citrate synthase metabolon is modulated by intermediates of the Krebs tricarboxylic acid cycle

The paper investigates how TCA cycle intermediates modulate the association of the MDH-CS metabolon, revealing their role in regulating metabolic flux and feedback mechanisms.

The diversity of quinoa morphological traits and seed metabolic composition

This study analyzes the seed metabolomes and agronomic traits of 471 quinoa cultivars to identify genetic diversity for breeding and genome editing.

2,3-cAMP treatment mimics stress molecular response in Arabidopsis thaliana

This study investigates how 2,3-cAMP treatment affects Arabidopsis thaliana by using multi-omics approaches, revealing its role in stress responses and membraneless organelle dynamics.

Manipulation of carotenoid metabolism stimulates biomass and stress tolerance in tomato

This study shows that modifying carotenoid metabolism in tomato improves biomass, stress tolerance, and yield while enhancing nutritional value and shelf life.

Autophagy is responsible for the accumulation of proteogenic dipeptides in response to heat stress in Arabidopsis thaliana.

The paper identifies autophagy as the pathway responsible for dipeptide accumulation under heat stress in Arabidopsis thaliana.

Arabidopsis REI-LIKE proteins activate ribosome biogenesis during cold acclimation

This study shows Arabidopsis REIL proteins are essential for ribosome biogenesis during cold acclimation, affecting ribosome composition and suppressing pre-initiation complexes.