Author

Abigail Howell

University of California San Diego

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Genomics· 2

Signature Assays, Organisms & Methods

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Approach:experimental assay· 2 Research Focus:gene regulatory network inference· 2 Organism:human· 2 Assay:scRNA-seq· 2 Approach:statistical model· 2 Assay:ATAC-seq· 1 Research Focus:cell-cell communication· 1 Research Focus:differential expression· 1

Frequent Co-Authors

Emily N. GriffiniD· 2 shared Kyle J. GaultoniD· 2 shared Abbey A Green· 1 shared Allen WangiD· 1 shared Carolyn McGrail· 1 shared Chun ZengiD· 1 shared Consuelo Walss‐BassiD· 1 shared Davey Mitchell SmithiD· 1 shared

Activity by Year

2025-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 30 mutual co-author links

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2 shared papersGenomics

Emily N. GriffinORCID

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2 papers

Recent·Most cited

Cell-type specific impact of opioid use disorder and HIV on the human forebrain and cerebellum

Abbey A Green, Tanmayi D. Vashist, Shweta Jakhmola, Xinze Chen, Gulshanbir Baidwan, Justin Buchanan, Shashi Kant Tiwari, Emily N. Griffin, Abigail Howell, Yuna Lee, David J. Moore, Sara Gianella, Davey Mitchell Smith, Quan Zhu, Consuelo Walss‐Bass, , Tariq M. Rana

This study examines the cell-type specific effects of opioid use disorder and HIV on the human brain, identifying changes in gene regulation, metabolism, and immune responses across different brain regions.

bioRxiv · Mar 3, 2026 · PreprintGenomics

Single-cell multiome and spatial profiling reveals pancreas cell type-specific gene regulatory programs driving type 1 diabetes progression

Rebecca L. Melton, Sara Jiménez, Weston S. Elison, Luca Tucciarone, Abigail Howell, Gaowei Wang, Denise A. Berti, Elisha Beebe, Michael Miller, Chun Zeng, Carolyn McGrail, Kennedy VanderStel, Katha Korgaonkar, Ruth M. Elgamal, Hannah M Mummey, , Kyle J. Gaulton

This study uses single-cell multiomics and spatial transcriptomics to identify gene regulatory programs in pancreatic cell types that drive type 1 diabetes progression.

Science Advances · Sep 10, 2025Peer-reviewedGenomics