Author

Ally Xinyi Kong

Fred Hutch Cancer Center

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Immunology· 1 Neuroscience· 1 Pharmacology & Toxicology· 1

Signature Assays, Organisms & Methods

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Research Focus:differential expression· 2 Approach:experimental assay· 2 Approach:statistical model· 2 Organism:zebrafish· 2 Assay:bulk RNA-seq· 1 Research Focus:cell type annotation· 1 Research Focus:database / resource· 1 Approach:deep learning· 1

Frequent Co-Authors

Aiden F EnoiD· 2 shared Haiwei GuiD· 2 shared Jinhua Chi· 2 shared Ping ZhangiD· 2 shared Yijie GengiD· 2 shared Alex Say· 1 shared Anna Buetow· 1 shared Ashraf Siddig YousifiD· 1 shared

Activity by Year

2025-2026 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 21 mutual co-author links

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2 shared papersPharmacology & Toxicology

Aiden F EnoORCID

Mutual co-authors in cluster

Author profile →

3 papers

Recent·Most cited

Proteome-wide reverse molecular docking reveals folic acid receptor as a mediator of PFAS-induced neurodevelopmental toxicity

Ally Xinyi Kong, Maja Johnson, Jinhua Chi, Aiden F Eno, Khoa Pham, Ping Zhang, Haiwei Gu, Yijie Geng

This study identifies folic acid receptor beta as a mediator of PFAS-induced neurodevelopmental toxicity using zebrafish models and reverse molecular docking.

Journal of Hazardous Materials · Apr 12, 2026Peer-reviewedPharmacology & Toxicology

Butyrate rescues chlorpyrifos-induced social deficits through inhibition of class I histone deacetylases

Leonardo Diaz, Ally Xinyi Kong, Ping Zhang, Jinhua Chi, Khoa Trong Pham, Maja Johnson, Aiden F Eno, Isabelle Douglas, Yuxuan Mao, James W. MacDonald, Julia Yue Cui, Theo K. Bammler, Haiwei Gu, Yijie Geng

The paper shows that butyrate rescues CPF-induced social deficits in zebrafish by inhibiting class I HDACs, linking CPF exposure to gut microbiome, metabolome, and epigenetic changes.

bioRxiv · Oct 19, 2025 · PreprintNeuroscience

A searchable database of publications using fluorescent probes and flow cytometry to study antigen-specific B cells

Sunil Palani, Ally Xinyi Kong, Anna Buetow, Ashraf Siddig Yousif, Alex Say, Zhongchen Wang, Kuntal Biswas, Julia Blaszczyk, Mônica Josiane Rodrigues‐Jesus, Darlene R. Malavé Ramos, Vignesh Senthilkumar, Scott Chappell, Joshua F. E. Koenig, Justin J. Taylor

The paper creates a searchable database of publications using fluorescent probes and flow cytometry to study antigen-specific B cells, showing increased research focus on pathogens like SARS-CoV-2 and HIV.

bioRxiv · Oct 8, 2025 · PreprintImmunology