Author

Amanda Ha

University of British Columbia

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Developmental Biology· 1 Molecular Biology· 1

Signature Assays, Organisms & Methods

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Research Focus:gene regulatory network inference· 2 Assay:bulk RNA-seq· 1 Assay:DNA methylation· 1 Approach:experimental assay· 1 Organism:human· 1 Organism:mouse· 1 Approach:statistical model· 1

Frequent Co-Authors

Aaron Bogutz· 2 shared Franck CourtiD· 2 shared Kazuhiko NakabayashiiD· 2 shared Louis LefebvreiD· 2 shared Philippe ArnaúdiD· 2 shared Alexandre Marcil· 1 shared Alice Murigneux· 1 shared Anne-Charlotte FromagetiD· 1 shared

Activity by Year

2026-2026 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 39 mutual co-author links

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2 shared papersMolecular Biology

Aaron Bogutz

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2 papers

Recent·Most cited

The elongation of Mest transcript into MestXL sustains, but does not initiate, the maternal allele bias of its convergent gene Copg2 during neurogenesis

Sophie Perillous, Anne-Charlotte Fromaget, Céline Gonthier‐Guéret, Ornella Clerici, Marion Espenel, Alice Murigneux, Sophie Phan, Léa Feit, Catherine Vaurs‐Barrière, Floric Slimani, Céline Lemmers, Davide Normanno, Amanda Ha, Nolan Ashworth, Aaron Bogutz, , Philippe Arnaúd

The paper investigates the regulation of maternal allele bias in Copg2 during neurogenesis, showing it involves a two-step mechanism beyond MestXL-mediated interference.

Nature Communications · Sep 23, 2026Peer-reviewedMolecular Biology

Genomic imprinting of the metabolic regulator gene Klf14 is regulated by a paternal sub-TAD anchored at Mest and a shared enhancer in mice.

Amanda Ha, Natsuki Hayashi, Aaron Bogutz, Benoît Moindrot, Laura Gómez, Juliette Harris, Alexandre Marcil, Franck Court, Miyuki Shindo, Philippe Arnaúd, Jacques Drouin, Thierry Forné, Daan Noordermeer, Shuji Takada, Kazuhiko Nakabayashi, Louis Lefebvre

This paper identifies a paternal sub-TAD and shared enhancer that regulate Klf14 genomic imprinting in mice, revealing a mechanism involving Mest and allele-specific CTCF binding.

bioRxiv · May 13, 2026 · PreprintDevelopmental Biology