Author

D. Toomre

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Cell Biology· 4 Biophysics· 2

Signature Assays, Organisms & Methods

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Approach:experimental assay· 5 Assay:fluorescence / live-cell microscopy· 5 Research Focus:cell signaling & trafficking· 3 Research Focus:cell type annotation· 3 Approach:deep learning· 2 Organism:human· 2 Research Focus:protein folding & dynamics· 2 Organism:bacteria (other)· 1

Frequent Co-Authors

A. Schepartz· 2 shared F. Rivera-Molina· 2 shared J. Bewersdorf· 2 shared J. Tyson· 2 shared L. Chu· 2 shared P. Kidd· 2 shared Z. Xi· 2 shared A. Anneken· 1 shared

Activity by Year

2019-2023 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 21 mutual co-author links

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2 shared papersCell Biology

A. Schepartz

Mutual co-authors in cluster

Author profile →

6 papers

Recent·Most cited

Augmented Super-Resolution Radial Fluctuations (aSRRF) Pushing the Limits of Structured Illumination Microscopy

H. Zhang, J. Wang, L. Jin, Y. Zhu, Y. Guo, M. Zhang, Y. Zhang, Z. Wang, Y. Su, Y. Wu, B. Ji, D. Toomre, X. Liu, Y. Xu

The paper introduces aSRRF, a method that enhances SIM resolution to ~50 nm isotropically using image augmentation without changing the optical setup or sample acquisition.

bioRxiv · Jul 5, 2023 · PreprintCell Biology

Unraveling cellular complexity with unlimited multiplexed super-resolution imaging

F. Schueder, F. Rivera-Molina, M. Su, P. Kidd, J. E. Rothman, D. Toomre, J. Bewersdorf

This paper introduces FLASH-PAINT, a method for rapid multiplexed super-resolution imaging of many molecular targets in mammalian cells, demonstrating its application in four cell biological studies.

bioRxiv · May 17, 2023 · PreprintCell Biology

Regulation of EGF-stimulated activation of the PI-3K/AKT pathway by exocyst-mediated exocytosis

S. An, A. Anneken, Z. Xi, C. Choi, J. Schlessinger, D. Toomre

This study shows that exocyst-mediated exocytosis regulates PI(3,4,5)P3 levels and AKT activation in response to EGF signaling in epithelial cells.

bioRxiv · Mar 21, 2022Cell Biology

Extremely bright, near-IR emitting spontaneously blinking fluorophores enable ratiometric multicolor nanoscopy in live cells

J. Tyson, K. Hu, S. Zheng, P. Kidd, N. Dadina, L. Chu, D. Toomre, J. Bewersdorf, A. Schepartz

The paper introduces a new near-IR fluorophore that enables two-color live-cell SMLM without chemical additives or multiple lasers.

bioRxiv · Jun 2, 2021Cell Biology

DNA-Origami-Based Fluorescence Brightness Standards for Convenient and Fast Protein Counting in Live Cells

N. D. Williams, A. Landajuela, R. K. Kasula, W. Zhou, J. T. Powell, Z. Xi, F. J. Isaacs, J. Berro, D. Toomre, E. Karatekin, C. Lin

The paper introduces DNA-origami-based fluorescence brightness standards for fast and convenient protein counting in live cells, compatible with various imaging applications.

bioRxiv · Sep 20, 2020Biophysics

Two-color nanoscopy of organelles for extended times with HIDE probes

L. Chu, J. Tyson, J. E. Shaw, F. Rivera-Molina, A. J. Koleske, A. Schepartz, D. Toomre

This paper introduces a new fluorophore and labeling strategy to enable long-term, multi-color nanoscopy of organelles with HIDE probes.

bioRxiv · May 22, 2019Biophysics