Author

Hilal Ozgur

European Molecular Biology Laboratory

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Microbiology· 2 Molecular Biology· 1

Signature Assays, Organisms & Methods

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Approach:experimental assay· 3 Research Focus:host-pathogen & immune response· 2 Organism:human· 2 Assay:metabolomics· 2 Assay:proteomics· 2 Research Focus:cell type annotation· 1 Research Focus:clustering· 1 Research Focus:differential expression· 1

Frequent Co-Authors

Anna E. LindelliD· 2 shared Bini RamachandraniD· 2 shared Indra RouxiD· 2 shared Kiran Raosaheb PatiliD· 2 shared Nonantzin Beristain CovarrubiasiD· 2 shared Sonja BlascheiD· 2 shared Stephan KamradiD· 2 shared Vladimı́r BenešiD· 2 shared

Activity by Year

2025-2026 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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2 shared papersMicrobiology

Anna E. LindellORCID

Mutual co-authors in cluster

Author profile →

3 papers

Recent·Most cited

Impact of low-calorie sweeteners on gut bacteria is modulated by common xenobiotics

Sonja Blasche, Vinita Periwal, Nonantzin Beristain Covarrubias, Anna E. Lindell, Indra Roux, Stephan Kamrad, Simone Mozzachiodi, Rob Bradley, Hilal Ozgur, Bini Ramachandran, Vladimı́r Beneš, Kiran Raosaheb Patil

This study investigates interactions between low-calorie sweeteners and xenobiotics on gut bacteria, finding synergistic effects that alter bacterial growth and host cell responses.

Molecular Systems Biology · Jun 25, 2026Peer-reviewedMicrobiology

Direct detection of CRISPR mutations and transcriptional responses at single cell resolution in vivo

John A. Hawkins, Siamak Redhai, Svenja Leible, Mireia Osuna Lopez, Hilal Ozgur, Tianyu Wang, Michaela Holzem, Michael Boutros, Oliver Stegle

This paper introduces scPT-seq, a method to detect CRISPR mutations and transcriptional responses at single-cell resolution in vivo, revealing clonal markers and lineage dynamics in Drosophila intestine.

bioRxiv · Dec 24, 2025 · PreprintMolecular Biology

Extensive PFAS accumulation by human gut bacteria

Anna E. Lindell, Anne Grießhammer, Lena Michaelis, Dimitrios Papagiannidis, Hannah Ochner, Stephan Kamrad, Rui Guan, Sonja Blasche, Leandro N. Ventimiglia, Bini Ramachandran, Hilal Ozgur, Aleksej Zelezniak, Nonantzin Beristain‐Covarrubias, Juan Carlos Yam‐Puc, Indra Roux, , Kiran Raosaheb Patil

This study shows human gut bacteria can accumulate PFAS, with some species like Bacteroides uniformis accumulating them to high concentrations, and identifies mechanisms involving transmembrane transport and efflux pumps.

Nature Microbiology · Jul 1, 2025Peer-reviewedMicrobiology