Author

J. K. Choi

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Cancer Biology· 2 Microbiology· 1

Signature Assays, Organisms & Methods

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Assay:bulk RNA-seq· 2 Research Focus:cell type annotation· 2 Research Focus:differential expression· 2 Research Focus:drug response / drug discovery· 2 Approach:experimental assay· 2 Organism:human· 2 Approach:statistical model· 2 Approach:biophysical modeling· 1

Frequent Co-Authors

J.-Y. Lee· 2 shared A. Voshall· 1 shared B. Lee· 1 shared D. G. Byeun· 1 shared D.-W. Kim· 1 shared D.-Y. Cho· 1 shared E. A. Lee· 1 shared E. Cho· 1 shared

Activity by Year

2023-2023 · peak 3/yr

Co-Author Collaboration Network

10 top collaborators · 23 mutual co-author links

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2 shared papersCancer Biology

J.-Y. Lee

Mutual co-authors in cluster

Author profile →

3 papers

Recent·Most cited

Genomic hypomethylation in cell-free DNA predicts responses to checkpoint blockade in lung and breast cancer

K. Kim, H. Kim, I. Shin, S.-J. Noh, J. Y. Kim, K. J. Suh, Y.-N. Kim, J.-Y. Lee, D.-Y. Cho, S. H. Kim, J. H. Kim, S.-H. Lee, J. K. Choi

This study develops iMethyl, a method to estimate genomic hypomethylation from cell-free DNA to predict responses to immune checkpoint blockade in cancer patients.

Scientific Reports · Dec 18, 2023Peer-reviewedCancer Biology

Pan-cancer analysis reveals multifaceted roles of retrotransposon-fusion RNAs

B. Lee, J. Park, A. Voshall, E. Maury, Y. Kang, Y. J. Kim, J.-Y. Lee, H.-R. Shim, H.-J. Kim, J.-W. Lee, M.-H. Jung, S.-C. Kim, H. B. K. Chu, D.-W. Kim, M. Kim, , E. A. Lee

The paper identifies cancer-specific transposon-fusion RNAs across 34 cancer types and finds they are associated with tumor suppressors and oncogenes, and can activate T-cells.

bioRxiv · Oct 16, 2023 · PreprintCancer Biology

Genetic and transcriptomic analysis of hyphal constriction based on a novel assay method in the rice blast fungus

E. Cho, S. H. Lee, M. Jeong, S. Mandal, S.-Y. Park, S. W. Nam, D. G. Byeun, J. K. Choi, Y.-H. Lee, J.-H. Shin, J. Jeon

The paper introduces an in vitro assay to study hyphal constriction in Magnaporthe oryzae, identifying transcriptional changes and a potential histone modification role in this process.

bioRxiv · Jun 14, 2023 · PreprintMicrobiology