Author

James Simone

National Institutes of Health

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Developmental Biology· 1

Signature Assays, Organisms & Methods

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Assay:bulk RNA-seq· 1 Research Focus:cell type annotation· 1 Assay:ChIP-seq· 1 Research Focus:differential expression· 1 Approach:experimental assay· 1 Research Focus:gene regulatory network inference· 1 Assay:Hi-C· 1 Organism:mouse· 1

Frequent Co-Authors

Astrid D. Desiree HaaseiD· 1 shared Jelena PerovanovićiD· 1 shared Jérome ChaliD· 1 shared Kan Jiang· 1 shared Kyung Dae Ko· 1 shared Mamduh KhatebiD· 1 shared Natalia Acevedo-Luna· 1 shared Olivier PourquiéiD· 1 shared

Activity by Year

2022-2022 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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1 shared paperDevelopmental Biology

Astrid D. Desiree HaaseORCID

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1 paper

Recent·Most cited

Transcriptomics, Regulatory Syntax, and Enhancer Identification in Heterogenous Populations of Mesoderm-Induced ESCs at Single-Cell Resolution

Mamduh Khateb, Jelena Perovanović, Kyung Dae Ko, Kan Jiang, Xuesong Feng, Natalia Acevedo-Luna, Jérome Chal, Veronica Ciuffoli, Pavol Genzor, James Simone, Astrid D. Desiree Haase, Olivier Pourquié, Stefania Dell’Orso, Vittorio Sartorelli

This study uses bulk and single-cell assays to analyze gene expression, histone modifications, and chromatin features in ESCs transitioning to mesoderm lineages, identifying cis-regulatory elements and transcription factors involved in lineage specification.

bioRxiv · Mar 29, 2022 · PreprintDevelopmental Biology