Author

K. Vandegrift

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Microbiology· 2 Biophysics· 1

Signature Assays, Organisms & Methods

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Approach:experimental assay· 2 Research Focus:host-pathogen & immune response· 2 Assay:bulk RNA-seq· 1 Organism:chicken / avian· 1 Approach:deep learning· 1 Research Focus:drug response / drug discovery· 1 Organism:human· 1 Organism:mouse· 1

Frequent Co-Authors

R. H. Nissly· 3 shared S. V. Kuchipudi· 3 shared C. D. Maranas· 2 shared A. Gontu· 1 shared A. J. K. Conlan· 1 shared B. M. Jayarao· 1 shared C. Chen· 1 shared D. Banerjee· 1 shared

Activity by Year

2020-2021 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 27 mutual co-author links

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Curved chords = mutual co-authorship

3 shared papersMicrobiology

R. H. Nissly

Mutual co-authors in cluster

Author profile →

3 papers

Recent·Most cited

Multiple spillovers and onward transmission of SARS-Cov-2 in free-living and captive White-tailed deer

S. V. Kuchipudi, M. Surendran-Nair, R. M. Ruden, M. Yon, R. H. Nissly, R. K. Nelli, L. Li, B. M. Jayarao, K. Vandegrift, C. D. Maranas, N. Levine, K. Willgert, A. J. K. Conlan, R. J. Olsen, J. Davis, , V. Kapur

SARS-CoV-2 was detected in one-third of sampled white-tailed deer in Iowa between September 2020 and January of 2021 that likely resulted from multiple human-to-deer spillover and deer-to-deer transmission events.

bioRxiv · Oct 31, 2021Microbiology

Computational prediction of the effect of amino acid changes on the binding affinity between SARS-CoV-2 spike protein and the human ACE2 receptor

C. Chen, V. S. Boorla, D. Banerjee, R. Chowdhury, V. S. Cavener, R. H. Nissly, A. Gontu, N. R. Boyle, K. Vandegrift, M. S. Nair, S. V. Kuchipudi, C. D. Maranas

The paper predicts the effect of amino acid changes on SARS-CoV-2 spike protein binding to hACE2 using molecular dynamics and a neural network, achieving 82.2% classification accuracy and 0.69 correlation with experimental data.

bioRxiv · Mar 24, 2021Biophysics

Influenza C and D viral load in cattle correlates with bovine respiratory disease (BRD): Emerging role of orthomyxoviruses in the pathogenesis of BRD

R. H. Nissly, N. Zaman, P. A. S. Ibrahim, K. McDaniel, L. Lim, J. N. Kiser, I. M. Bird, S. K. Chothe, G. L. Bhushan, K. Vandegrift, H. L. Neibergs, S. V. Kuchipudi

This study investigates the association between influenza C and D viral loads and bovine respiratory disease in cattle, finding higher viral loads and coinfections in BRD-symptomatic animals.

Virology · Dec 1, 2020Peer-reviewedMicrobiology