Author

L. J. Barkal

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Microbiology· 4

Signature Assays, Organisms & Methods

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Organism:human· 3 Research Focus:cell type annotation· 2 Approach:experimental assay· 2 Research Focus:host-pathogen & immune response· 2 Assay:bulk RNA-seq· 1 Research Focus:cell-cell communication· 1 Research Focus:clustering· 1 Approach:deep learning· 1

Frequent Co-Authors

N. L. Haddock· 2 shared A. Dimas· 1 shared A. Hurley· 1 shared A. Naziripour· 1 shared A. S. Bhatt· 1 shared A. Veinbachs· 1 shared A. Zhao· 1 shared C. O. Barnes· 1 shared

Activity by Year

2022-2024 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 18 mutual co-author links

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2 shared papersMicrobiology

N. L. Haddock

Mutual co-authors in cluster

Author profile →

4 papers

Recent·Most cited

Discovery and engineering of the antibody response against a prominent skin commensal

D. A. Bousbaine, K. Bauman, Y. E. Chen, V. Yu, P. Lalgudi, A. Naziripour, A. Veinbachs, J. Phung, T. Nguyen, M. Swenson, E. Lee, A. Dimas, S. Jain, X. Meng, T. Pham, , M. A. Fischbach

The paper identifies an antibody response against Staphylococcus epidermidis and shows how it can be engineered for therapeutic vaccination.

bioRxiv · Jan 23, 2024 · PreprintMicrobiology

Bacteriophage populations mirror those of bacterial pathogens at sites of infection

N. L. Haddock, L. J. Barkal, P. L. Bollyky

The paper analyzes cell-free DNA from infected bodily fluids to show that bacteriophage sequences mirror the abundance of their bacterial hosts at infection sites.

bioRxiv · May 17, 2023Microbiology

Microbial Community Interactions on a Chip

D. S. Juang, W. E. Wightman, G. L. Lozano, L. J. Barkal, J. Yu, M. F. Garavito, A. Hurley, O. S. Venturelli, J. Handelsman, D. J. Beebe

The paper introduces a Microbial Community Interaction device to systematically study chemical and biological interactions in microbial communities, revealing antagonistic effects of gentamicin and vancomycin and community-level growth impacts.

bioRxiv · Oct 17, 2022Microbiology

The circulating phageome reflects bacterial infections

N. L. Haddock, L. J. Barkal, N. Ram-Mohan, G. Kaber, C. Y. Chiu, A. S. Bhatt, S. Yang, P. Bollyky

The paper shows that circulating phageome in cfDNA reflects bacterial infections and can distinguish between pathogenic and contaminant bacteria.

bioRxiv · Aug 15, 2022 · PreprintMicrobiology