Author

N. Ram-Mohan

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Microbiology· 4 Immunology· 3

Signature Assays, Organisms & Methods

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Organism:human· 5 Assay:bulk RNA-seq· 3 Research Focus:cell type annotation· 3 Research Focus:differential expression· 3 Approach:experimental assay· 3 Approach:statistical model· 3 Research Focus:chromatin & epigenetic regulation· 2 Assay:DNA methylation· 2

Frequent Co-Authors

S. Yang· 4 shared R. Abe· 2 shared A. Hazery· 1 shared A. Kundaje· 1 shared A. M. Makkay· 1 shared A. S. Bhatt· 1 shared A. S. Louyakis· 1 shared B. A. Pinsky· 1 shared

Activity by Year

2018-2023 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 13 mutual co-author links

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4 shared papersImmunology

S. Yang

Mutual co-authors in cluster

Author profile →

7 papers

Recent·Most cited

Neutrophil Extracellular Traps have DNAzyme activity that drives bactericidal potential

T.-H. Ku, N. Ram-Mohan, E. J. Zudock, R. Abe, S. Yang

The paper identifies G-quadruplex/hemin DNAzyme complexes in NETs as the primary drivers of bactericidal activity through hydroxyl radical production.

bioRxiv · Oct 23, 2023 · PreprintImmunology

Rapid molecular phenotypic antimicrobial susceptibility test for Neisseria gonorrhoeae based on propidium monoazide viability PCR

K. C. Tjandra, N. Ram-Mohan, R. Abe, J. Wang, S. Yang

This paper develops a rapid PCR-based method to determine antimicrobial susceptibility of Neisseria gonorrhoeae using propidium monoazide and qPCR, achieving high accuracy in under 30 minutes.

bioRxiv · Mar 1, 2023 · PreprintMicrobiology

The circulating phageome reflects bacterial infections

N. L. Haddock, L. J. Barkal, N. Ram-Mohan, G. Kaber, C. Y. Chiu, A. S. Bhatt, S. Yang, P. Bollyky

The paper shows that circulating phageome in cfDNA reflects bacterial infections and can distinguish between pathogenic and contaminant bacteria.

bioRxiv · Aug 15, 2022 · PreprintMicrobiology

Disease diagnostics using machine learning of immune receptors

M. E. Zaslavsky, E. Craig, J. K. Michuda, N. Sehgal, N. Ram-Mohan, J.-Y. Lee, K. D. Nguyen, R. A. Hoh, T. D. Pham, K. Röltgen, B. Lam, E. S. Parsons, S. R. Macwana, W. DeJager, E. M. Drapeau, , S. D. Boyd

The paper develops Mal-ID, a machine learning framework using immune receptor data to diagnose diseases, detecting infections, autoimmune disorders, and vaccine responses.

bioRxiv · Apr 26, 2022Immunology

Insights into gene expression changes under conditions that facilitate horizontal gene transfer (mating) of a model Archaeon

A. M. Makkay, A. S. Louyakis, N. Ram-Mohan, U. Gophna, J. P. Gogarten, R. T. Papke

The paper identifies genes and pathways associated with mating in Haloferax volcanii through transcriptomic analysis of gene expression during mating conditions.

Scientific Reports · Dec 18, 2020Peer-reviewedMicrobiology

Integrative profiling of early host chromatin accessibility responses in human neutrophils with sensitive pathogen detection.

N. Ram-Mohan, S. Thair, U. Litzenburger, S. B. Cogill, N. Andini, X. Yang, H. Chang, S. S. Yang

The paper profiles early chromatin accessibility in human neutrophils challenged with pathogens and TLR ligands, identifying challenge-specific epigenomic responses and gene regulation mechanisms.

bioRxiv · Apr 28, 2020Immunology

The Transcriptional landscape of Streptococcus pneumoniae TIGR4 reveals a complex operon architecture and abundant riboregulation critical for growth and virulence

I. Warrier, N. Ram-Mohan, Z. Zhu, A. Hazery, H. Echlin, J. Rosch, M. M. Meyer, T. van Opijnen

bioRxiv · Nov 8, 2018Microbiology