Author

Marcel Waschow

German Cancer Research Center

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Genomics· 1 Systems Biology· 1

Signature Assays, Organisms & Methods

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Research Focus:cell type annotation· 2 Research Focus:differential expression· 2 Approach:experimental assay· 2 Organism:human· 2 Assay:imaging· 2 Research Focus:gene regulatory network inference· 1 Assay:scRNA-seq· 1

Frequent Co-Authors

Christian ConradiD· 2 shared Roland EilsiD· 2 shared Björn Eismann· 1 shared Christiane FuchsiD· 1 shared Claudia R. BalliD· 1 shared Fabian Joachim TheisiD· 1 shared Friedrich PreußeriD· 1 shared Hanno GlimmiD· 1 shared

Activity by Year

2018-2018 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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2 shared papersGenomics

Christian ConradORCID

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2 papers

Recent·Most cited

pheno-seq - linking morphological features to gene expression in 3D cell culture systems

Stephan M. Tirier, Jeongbin Park, Friedrich Preußer, Lisa Amrhein, Zuguang Gu, Simon Steiger, Jan‐Philipp Mallm, Marcel Waschow, Björn Eismann, Marta Gut, Ivo Glynne Gut, Karsten Rippe, Matthias Schlesner, Fabian Joachim Theis, Christiane Fuchs, , Christian Conrad

The paper introduces pheno-seq, a method that links morphological features to gene expression in 3D cell cultures, showing its ability to identify morphology-specific genes and regulatory states not captured by scRNA-seq.

bioRxiv · Sep 12, 2018 · PreprintGenomics

Unraveling mitotic protein networks by 3D multiplexed epitope drug screening

Lorenz Maier, Stefan M. Kallenberger, Katharina Jechow, Marcel Waschow, Roland Eils, Christian Conrad

This paper introduces 3D SPECS, a method to map spatial protein localization in 3D cell cultures and analyze mitotic protein networks, revealing novel insights into spindle fragility and chromatin stress.

Molecular Systems Biology · Aug 1, 2018Peer-reviewedSystems Biology