Author

Nida Javeed

University of Massachusetts Chan Medical School

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Genomics· 1 Molecular Biology· 1

Signature Assays, Organisms & Methods

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Assay:bulk RNA-seq· 1 Assay:CRISPR screen· 1 Research Focus:differential expression· 1 Research Focus:drug response / drug discovery· 1 Approach:experimental assay· 1 Research Focus:gene regulatory network inference· 1 Organism:human· 1 Organism:mouse· 1

Frequent Co-Authors

Athma A. PaiiD· 2 shared Eraj Shafiq KhokhariD· 2 shared Aamir MiriD· 1 shared Ayush KumariD· 1 shared Dan WangiD· 1 shared Emmanouela TsagkarakiiD· 1 shared Erik J. SontheimeriD· 1 shared Esther MintzeriD· 1 shared

Activity by Year

2021-2025 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 38 mutual co-author links

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2 shared papersGenomics

Athma A. PaiORCID

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2 papers

Recent·Most cited

Pervasive noise in human splice site selection

Eraj Shafiq Khokhar, Kaitlyn Brokaw, Zachary J. Kartje, Valeria C. Sanabria, Nida Javeed, Ayush Kumar, Jonathan K. Watts, Athma A. Pai

The paper tracks splicing intermediates in human cells using ultra-deep sequencing and finds pervasive usage of low-fidelity splice sites associated with genomic features that promote splicing noise.

bioRxiv · Jul 16, 2025 · PreprintGenomics

Precision Cas9 Genome Editing in vivo with All-in-one, Self-targeting AAV Vectors

Raed Ibraheim, Phillip W.L. Tai, Aamir Mir, Nida Javeed, Jiaming Wang, Tomás Rodríguez, Suk Namkung, Samantha J. Nelson, Eraj Shafiq Khokhar, Esther Mintzer, Stacy A. Maitland, Zexiang Chen, Yueying Cao, Emmanouela Tsagkaraki, Scot A. Wolfe, , Erik J. Sontheimer

This paper develops single-AAV vectors for precise in vivo genome editing using Nme2Cas9 with HDR templates or multiple sgRNAs, showing efficacy in treating HT-I and MPS-I mouse models.

Nature Communications · Nov 1, 2021Peer-reviewedMolecular Biology