Author

O. Kuipers

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Microbiology· 3 Ecology· 1 Evolutionary Biology· 1

Signature Assays, Organisms & Methods

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Approach:experimental assay· 5 Organism:bacteria (other)· 3 Research Focus:host-pathogen & immune response· 3 Assay:bulk RNA-seq· 1 Research Focus:cell type annotation· 1 Research Focus:cell-cell communication· 1 Research Focus:differential expression· 1 Research Focus:drug response / drug discovery· 1

Frequent Co-Authors

A. Brauer· 1 shared A. de Jong· 1 shared A. de Vicente· 1 shared A. Lapanje· 1 shared A. Mateus· 1 shared A. Milanese· 1 shared A. R. Brochado· 1 shared A. Typas· 1 shared

Activity by Year

2020-2024 · peak 3/yr

Co-Author Collaboration Network

10 top collaborators · 12 mutual co-author links

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1 shared paperMicrobiology

A. Brauer

Mutual co-authors in cluster

Author profile →

5 papers

Recent·Most cited

Community context influences the conjugation efficiency of E. coli

M. Bustamante, F. Koopman, J. Martens, J. K. Brons, J. DelaFuente, O. Kuipers, G. S. van Doorn, M. de Vos

The paper investigates how polymicrobial communities affect conjugation rates of uropathogenic E. coli in artificial urine medium, finding that Gram-positive enterococci enhance conjugation rates.

bioRxiv · Jan 30, 2024 · PreprintEcology

High-throughput profiling of drug interactions in Gram-positive bacteria

E. Cacace, V. Kim, M. Knopp, M. Tietgen, A. Brauer, K. Inecik, A. Mateus, A. Milanese, M. Torrissen Marli, K. Mitosch, J. Selkrig, A. R. Brochado, O. Kuipers, M. Kjos, G. Zeller, , A. Typas

This study systematically tests drug combinations in Gram-positive bacteria, identifying many new synergies and antagonisms, including effective combinations against drug-resistant strains.

bioRxiv · Dec 23, 2022 · PreprintMicrobiology

Alternative phage-host interaction in Lactococcus lactis: the carrier state drives rapid evolution of phages

B. Marcelli, A. de Jong, T. Janzen, J. Kok, O. Kuipers

The paper shows that a bacteriophage in Lactococcus lactis can transition from a carrier state to an active lytic cycle upon infection by a second phage, leading to rapid genomic evolution and host range diversification.

bioRxiv · Apr 27, 2020 · PreprintEvolutionary Biology

Microbial competition reduces interaction distances to the low {micro}m-range

R. J. van Tatenhove-Pel, T. Rijavec, A. Lapanje, I. van Swam, E. Zwering, J. Hernandez, O. Kuipers, C. Picioreanu, B. Teusink, H. Bachmann

The paper shows that microbial competition reduces interaction distances between cells to the low micrometer-range in three-dimensional systems.

bioRxiv · Jan 22, 2020Microbiology

Biofilm formation displays intrinsic offensive and defensive features of Bacillus cereus

J. Caro-Astorga, E. Frenzel, J. R. Perkins, A. de Vicente, J. A. Garcia Ranea, O. Kuipers, D. Romero

The paper shows that Bacillus cereus forms biofilms with defensive and offensive subpopulations, using RNAseq and iTRAQ to reveal metabolic and functional differences.

npj Biofilms and Microbiomes · Jan 15, 2020Peer-reviewedMicrobiology